Personal tools

Difference between revisions of "TSS:Mm 99960.1"

From referenceTSS

Jump to: navigation, search
 
Line 1: Line 1:
 
{{TSSDetail
 
{{TSSDetail
 
|Ldlb=
 
|Ldlb=
|all_trans=BC063056:-31 AF109377:-32 AK152464:-39 AK171574:-43 AK220387:-46 AK159497:-48 NM_013581:-49 AK162971:-49 AK034636:-49 ENSMUST00000063776.13:-250 BC049541:-250 ENSMUST00000018805.14:-409 AK158507:-409
+
|all_trans=MGI:1333873
 
|chr=chr11
 
|chr=chr11
 
|cpg_percent=0.13
 
|cpg_percent=0.13
Line 24: Line 24:
 
|nearest_refseq=NM_013581
 
|nearest_refseq=NM_013581
 
|nearest_unigene=Mm.261620
 
|nearest_unigene=Mm.261620
|num_trans=13
+
|num_trans=16834
 
|species=mouse
 
|species=mouse
 
|start=113649577
 
|start=113649577

Latest revision as of 19:37, 28 July 2021

Basic information about the TSS


TSS ID:mm_99960.1
Species:mouse
Chr:chr11
TSS Classification:yes
Start:113649577
End:113649584
Strand:+
TSS Score:1
Start of the center position in the TSS region:113649580
End of the center position in the TSS region:113649581



Gene and protein annotation


Transcript_name:BC063056
Distance:-31
GeneID:16834
HGNC/MGI_ID:MGI:1333873
UniProt_ID:
Gene_name:component of oligomeric golgi complex 1
Gene_symbol:Cog1
Gene_synonyms:
Gene_source:MGI:1333873



Transcript annotation


Transcript_name:BC063056
Distance:-31
Num_trans:16834
All_trans:MGI:1333873



TATA-Box annotation


Distance to TSS:52
Nearest PromoterID:NM_013581
Entrez ID:16834
Nearest Unigene:Mm.261620
Nearest Refseq:NM_013581
Nearest Ensembl:ENSMUSG00000018661
Gene Name:component of oligomeric golgi complex 1
Gene Alias:6030445I15|Ldlb|mKIAA1381
Gene Description:component of oligomeric golgi complex 1
Gene Type:protein-coding
CpG%:0.13
GC%:0.721393
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):