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Difference between revisions of "TSS:Mm 99967.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=ENSMUST00000106621.3:-164 AK017508:-164 ENSMUST00000123466.1:-171 AK139389:-171 NM_177777:-177 NM_001361593:-177 ENSMUST00000042227.14:-199 BC048942:-199 AK171307:-205 ENSMUST00000153732.1:465
+
|all_trans=MGI:106356
 
|chr=chr11
 
|chr=chr11
 
|cpg_percent=0.1
 
|cpg_percent=0.1
Line 22: Line 22:
 
|nearest_refseq=NM_177777
 
|nearest_refseq=NM_177777
 
|nearest_unigene=Mm.239566
 
|nearest_unigene=Mm.239566
|num_trans=10
+
|num_trans=276852
 
|species=mouse
 
|species=mouse
 
|start=113684610
 
|start=113684610

Latest revision as of 19:37, 28 July 2021

Basic information about the TSS


TSS ID:mm_99967.1
Species:mouse
Chr:chr11
TSS Classification:yes
Start:113684610
End:113684621
Strand:+
TSS Score:1
Start of the center position in the TSS region:113684615
End of the center position in the TSS region:113684616



Gene and protein annotation


Transcript_name:ENSMUST00000106621.3 AK017508
Distance:-164
GeneID:276852
HGNC/MGI_ID:MGI:106356
UniProt_ID:Q6PIX9
Gene_name:DNA segment, Chr 11, Wayne State University 47, expressed
Gene_symbol:D11Wsu47e
Gene_synonyms:
Gene_source:MGI:106356



Transcript annotation


Transcript_name:ENSMUST00000106621.3 AK017508
Distance:-164
Num_trans:276852
All_trans:MGI:106356



TATA-Box annotation


Distance to TSS:182
Nearest PromoterID:NM_001361593
Entrez ID:276852
Nearest Unigene:Mm.239566
Nearest Refseq:NM_177777
Nearest Ensembl:ENSMUSG00000041623
Gene Name:DNA segment, Chr 11, Wayne State University 47, expressed
Gene Alias:-
Gene Description:DNA segment, Chr 11, Wayne State University 47, expressed
Gene Type:protein-coding
CpG%:0.1
GC%:0.656716
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):