Difference between revisions of "TSS:Mm 99975.1"
From referenceTSS
| Line 2: | Line 2: | ||
|5330435L01Rik= | |5330435L01Rik= | ||
|Sdk-2= | |Sdk-2= | ||
| − | |all_trans= | + | |all_trans=MGI:1916667 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
| Line 25: | Line 25: | ||
|nearest_refseq=NM_172800 | |nearest_refseq=NM_172800 | ||
|nearest_unigene=Mm.130504 | |nearest_unigene=Mm.130504 | ||
| − | |num_trans= | + | |num_trans= |
|species=mouse | |species=mouse | ||
|start=114091404 | |start=114091404 | ||
|start_of_center_position=114091408 | |start_of_center_position=114091408 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENSMUST00000129365.1 | + | |transcript_name=ENSMUST00000129365.1 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_99975.1 | |tss_id=mm_99975.1 | ||
Latest revision as of 19:37, 28 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 114091408 |
|---|---|
| End of the center position in the TSS region: | 114091409 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENSMUST00000129365.1 |
|---|---|
| Distance: | 0 |
| Num_trans: | |
| All_trans: | MGI:1916667 |
TATA-Box annotation
| Distance to TSS: | -24380 |
|---|---|
| Nearest PromoterID: | NM_172800 |
| Entrez ID: | 237979 |
| Nearest Unigene: | Mm.130504 |
| Nearest Refseq: | NM_172800 |
| Nearest Ensembl: | ENSMUSG00000041592 |
| Gene Name: | RIKEN cDNA 1700025D23 gene |
| Gene Alias: | 4632412F08Rik|5330435L01Rik|Sdk-2|mKIAA1514 |
| Gene Description: | sidekick cell adhesion molecule 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.447761 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
