Template:TSSDetail

Basic information about the TSS

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TSS ID: {{{tss_id}}} Species: {{{species}}} Chr: {{{chr}}} TSS Classification: {{{tss_classification}}} Start: {{{start}}} End: {{{end}}} Strand: {{{strand}}} TSS Score: {{{strand}}}

Gene and protein annotation

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Transcript_name: {{{transcript_name}}} Distance: {{{distance}}} GeneID: {{{gene_id}}} HGNC/MGI_ID: {{{hgnc_mgi_id}}} UniProt_ID: {{{uniprot_id}}} Gene_name: {{{gene_name}}} Gene_symbol: {{{gene_symbol}}} Gene_synonyms: {{{gene_synonyms}}} Gene_source: {{{gene_source}}}

Transcript annotation

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Transcript_name:	{{{transcript_name}}}
Distance:	{{{distance}}}
Num_trans:	{{{num_trans}}}
All_trans:	:{{{all_trans}}}

TATA-Box annotation

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Distance to TSS:	{{{distance_to_tss}}}
Nearest PromoterID:	{{{nearest_promoter_id}}}
Entrez ID:	{{{entrez_id}}}
Nearest Unigene:	{{{nearest_unigene}}}
Nearest Refseq:	{{{nearest_refseq}}}
Nearest Ensembl:	{{{nearest_ensembl}}}
Gene Name:	{{{gene_name}}}
Gene Alias:	{{{gene_alias}}}
Gene Description:	{{{gene_description}}}
Gene Type:	{{{gene_type}}}
CpG%:	{{{cpg_percent}}}
GC%:	{{{gc_percent}}}
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):	{{{tata_box}}}