Personal tools

Difference between revisions of "Template:TSSDetail"

From referenceTSS

Jump to: navigation, search
m
m
Line 1: Line 1:
{{Loading|loadingimage=sprites.gif}}<br><br>
+
{{Loading|loadingimage=sprites.gif}}
<style>
+
<html><style>
 
table {
 
table {
 
border-collapse:collapse;
 
border-collapse:collapse;
Line 27: Line 27:
 
     word-wrap:break-word;
 
     word-wrap:break-word;
 
}
 
}
</style>
+
</style></html>
 
<span class="section_head">Basic information about the TSS</span>
 
<span class="section_head">Basic information about the TSS</span>
 
<hr width="370px" size="2" style="text-align:left;margin-left:0" noshade>
 
<hr width="370px" size="2" style="text-align:left;margin-left:0" noshade>

Revision as of 13:21, 7 March 2018

Basic information about the TSS


TSS ID:
Species:{{{species}}}
Chr:{{{chr}}}
TSS Classification:{{{tss_classification}}}
Start:{{{start}}}
End:{{{end}}}
Strand:{{{strand}}}
TSS Score:{{{strand}}}



Gene and protein annotation


Transcript_name:{{{transcript_name}}}
Distance:{{{distance}}}
GeneID:{{{gene_id}}}
HGNC/MGI_ID:{{{hgnc_mgi_id}}}
UniProt_ID:{{{uniprot_id}}}
Gene_name:{{{gene_name}}}
Gene_symbol:{{{gene_symbol}}}
Gene_synonyms:{{{gene_synonyms}}}
Gene_source:{{{gene_source}}}



Transcript annotation


Transcript_name:{{{transcript_name}}}
Distance:{{{distance}}}
Num_trans:{{{num_trans}}}
All_trans::{{{all_trans}}}



TATA-Box annotation


Distance to TSS:{{{distance_to_tss}}}
Nearest PromoterID:{{{nearest_promoter_id}}}
Entrez ID:{{{entrez_id}}}
Nearest Unigene:{{{nearest_unigene}}}
Nearest Refseq:{{{nearest_refseq}}}
Nearest Ensembl:{{{nearest_ensembl}}}
Gene Name:{{{gene_name}}}
Gene Alias:{{{gene_alias}}}
Gene Description:{{{gene_description}}}
Gene Type:{{{gene_type}}}
CpG%:{{{cpg_percent}}}
GC%:{{{gc_percent}}}
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):{{{tata_box}}}