Difference between revisions of "TSS:Hg 1.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|all_trans=ENST00000416931.1:-130 ENST00000457540.1:420 | |all_trans=ENST00000416931.1:-130 ENST00000457540.1:420 | ||
| + | |chr=chr1 | ||
|cpg_percent=0.035 | |cpg_percent=0.035 | ||
|distance=-130 | |distance=-130 | ||
|distance_to_tss=-197 | |distance_to_tss=-197 | ||
| + | |end=629220 | ||
|entrez_id=101928626 | |entrez_id=101928626 | ||
|gc_percent=0.427861 | |gc_percent=0.427861 | ||
|gene_alias=- | |gene_alias=- | ||
|gene_description=uncharacterized LOC101928626 | |gene_description=uncharacterized LOC101928626 | ||
| − | |gene_name= | + | |gene_id= |
| + | |gene_name=mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 1 pseudogene 23 | ||
| + | |gene_source=HGNC:42092 | ||
| + | |gene_symbol=MTND1P23 | ||
| + | |gene_synonyms= | ||
|gene_type=ncRNA | |gene_type=ncRNA | ||
| + | |hgnc_mgi_id=HGNC:42092 | ||
|nearest_ensembl=ENSG00000230021 | |nearest_ensembl=ENSG00000230021 | ||
|nearest_promoter_id=NR_125957 | |nearest_promoter_id=NR_125957 | ||
| Line 15: | Line 22: | ||
|nearest_unigene=Hs.637667 | |nearest_unigene=Hs.637667 | ||
|num_trans=2 | |num_trans=2 | ||
| + | |species=human | ||
| + | |start=629191 | ||
| + | |strand=+ | ||
|transcript_name=ENST00000416931.1 | |transcript_name=ENST00000416931.1 | ||
| + | |tss_classification=no | ||
|tss_id=hg_1.1 | |tss_id=hg_1.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 16:50, 8 March 2018
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000416931.1 |
|---|---|
| Distance: | -130 |
| Num_trans: | 2 |
| All_trans: | ENST00000416931.1:-130 ENST00000457540.1:420 |
TATA-Box annotation
| Distance to TSS: | -197 |
|---|---|
| Nearest PromoterID: | NR_125957 |
| Entrez ID: | 101928626 |
| Nearest Unigene: | Hs.637667 |
| Nearest Refseq: | NR_125957 |
| Nearest Ensembl: | ENSG00000230021 |
| Gene Name: | mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 1 pseudogene 23 |
| Gene Alias: | - |
| Gene Description: | uncharacterized LOC101928626 |
| Gene Type: | ncRNA |
| CpG%: | 0.035 |
| GC%: | 0.427861 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
