Difference between revisions of "TSS:Hg 10.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=ENST00000414273.1:-418 | ||
| + | |chr=chr1 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
| + | |distance=-418 | ||
|distance_to_tss=918 | |distance_to_tss=918 | ||
| + | |end=631498 | ||
|entrez_id=102465432 | |entrez_id=102465432 | ||
|gc_percent=0.492537 | |gc_percent=0.492537 | ||
|gene_alias=hsa-mir-6723 | |gene_alias=hsa-mir-6723 | ||
|gene_description=microRNA 6723 | |gene_description=microRNA 6723 | ||
| − | |gene_name= | + | |gene_id= |
| + | |gene_name=MT-CO1 pseudogene 12 | ||
| + | |gene_source=HGNC:52014 | ||
| + | |gene_symbol=MTCO1P12 | ||
| + | |gene_synonyms= | ||
|gene_type=ncRNA | |gene_type=ncRNA | ||
| + | |hgnc_mgi_id=HGNC:52014 | ||
|nearest_ensembl=ENSG00000278791 | |nearest_ensembl=ENSG00000278791 | ||
|nearest_promoter_id=NR_106781 | |nearest_promoter_id=NR_106781 | ||
|nearest_refseq=NR_106781 | |nearest_refseq=NR_106781 | ||
|nearest_unigene= | |nearest_unigene= | ||
| + | |num_trans=1 | ||
| + | |species=human | ||
| + | |start=631491 | ||
| + | |strand=+ | ||
| + | |transcript_name=ENST00000414273.1 | ||
| + | |tss_classification=no | ||
|tss_id=hg_10.1 | |tss_id=hg_10.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 16:59, 8 March 2018
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000414273.1 |
|---|---|
| Distance: | -418 |
| Num_trans: | 1 |
| All_trans: | ENST00000414273.1:-418 |
TATA-Box annotation
| Distance to TSS: | 918 |
|---|---|
| Nearest PromoterID: | NR_106781 |
| Entrez ID: | 102465432 |
| Nearest Unigene: | |
| Nearest Refseq: | NR_106781 |
| Nearest Ensembl: | ENSG00000278791 |
| Gene Name: | MT-CO1 pseudogene 12 |
| Gene Alias: | hsa-mir-6723 |
| Gene Description: | microRNA 6723 |
| Gene Type: | ncRNA |
| CpG%: | 0.015 |
| GC%: | 0.492537 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
