Difference between revisions of "TSS:Hg 100004.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.035 |distance_to_tss=-599 |entrez_id=4781 |gc_percent=0.532338 |gene_alias=CTF|HMGIC/NFIB|NF-I/B|NF1-B|NFI-B|NFI-RED|NFIB2|NFIB3 |gene_description=n...") |
|||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |HMGIC/NFIB= | ||
| + | |NF-I/B= | ||
| + | |NF1-B= | ||
| + | |NFI-B= | ||
| + | |NFI-RED= | ||
| + | |NFIB2= | ||
| + | |NFIB3= | ||
| + | |all_trans=ENST00000397579.6:62 uc011lmo.3:62 ENST00000397581.6:125 uc064sed.1:125 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.035 | |cpg_percent=0.035 | ||
| + | |distance=62 | ||
|distance_to_tss=-599 | |distance_to_tss=-599 | ||
| + | |end=14314646 | ||
|entrez_id=4781 | |entrez_id=4781 | ||
|gc_percent=0.532338 | |gc_percent=0.532338 | ||
|gene_alias=CTF|HMGIC/NFIB|NF-I/B|NF1-B|NFI-B|NFI-RED|NFIB2|NFIB3 | |gene_alias=CTF|HMGIC/NFIB|NF-I/B|NF1-B|NFI-B|NFI-RED|NFIB2|NFIB3 | ||
|gene_description=nuclear factor I B | |gene_description=nuclear factor I B | ||
| − | |gene_name=NFIB | + | |gene_id=4781 |
| + | |gene_name=nuclear factor I/B | ||
| + | |gene_source=HGNC:7785 | ||
| + | |gene_symbol=NFIB | ||
| + | |gene_synonyms=NFI-RED NFIB2 NFIB3 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:7785 | ||
|nearest_ensembl=ENSG00000147862 | |nearest_ensembl=ENSG00000147862 | ||
|nearest_promoter_id=NM_001190737 | |nearest_promoter_id=NM_001190737 | ||
|nearest_refseq=NM_005596 | |nearest_refseq=NM_005596 | ||
|nearest_unigene=Hs.644095 | |nearest_unigene=Hs.644095 | ||
| + | |num_trans=4 | ||
| + | |species=human | ||
| + | |start=14314643 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000397579.6 uc011lmo.3 | ||
| + | |tss_classification=no | ||
|tss_id=hg_100004.1 | |tss_id=hg_100004.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=Q5VW27 | ||
}} | }} | ||
Revision as of 16:59, 8 March 2018
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000397579.6 uc011lmo.3 |
|---|---|
| Distance: | 62 |
| Num_trans: | 4 |
| All_trans: | ENST00000397579.6:62 uc011lmo.3:62 ENST00000397581.6:125 uc064sed.1:125 |
TATA-Box annotation
| Distance to TSS: | -599 |
|---|---|
| Nearest PromoterID: | NM_001190737 |
| Entrez ID: | 4781 |
| Nearest Unigene: | Hs.644095 |
| Nearest Refseq: | NM_005596 |
| Nearest Ensembl: | ENSG00000147862 |
| Gene Name: | nuclear factor I/B |
| Gene Alias: | CTF |
| Gene Description: | nuclear factor I B |
| Gene Type: | protein-coding |
| CpG%: | 0.035 |
| GC%: | 0.532338 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
