Difference between revisions of "TSS:Hg 10006.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.175 |distance_to_tss=-108 |entrez_id=387509 |gc_percent=0.855721 |gene_alias=PGR1 |gene_description=G protein-coupled receptor 153 |gene_name=GPR153...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=ENST00000377893.2:77 NM_207370:77 uc001amp.2:77 BC068275:77 | ||
| + | |chr=chr1 | ||
|cpg_percent=0.175 | |cpg_percent=0.175 | ||
| + | |distance=77 | ||
|distance_to_tss=-108 | |distance_to_tss=-108 | ||
| + | |end=6261114 | ||
|entrez_id=387509 | |entrez_id=387509 | ||
|gc_percent=0.855721 | |gc_percent=0.855721 | ||
|gene_alias=PGR1 | |gene_alias=PGR1 | ||
|gene_description=G protein-coupled receptor 153 | |gene_description=G protein-coupled receptor 153 | ||
| − | |gene_name=GPR153 | + | |gene_id=387509 |
| + | |gene_name=G protein-coupled receptor 153 | ||
| + | |gene_source=HGNC:23618 | ||
| + | |gene_symbol=GPR153 | ||
| + | |gene_synonyms=PGR1 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:23618 | ||
|nearest_ensembl=ENSG00000158292 | |nearest_ensembl=ENSG00000158292 | ||
|nearest_promoter_id=NM_207370 | |nearest_promoter_id=NM_207370 | ||
|nearest_refseq=NM_207370 | |nearest_refseq=NM_207370 | ||
|nearest_unigene=Hs.531581 | |nearest_unigene=Hs.531581 | ||
| + | |num_trans=4 | ||
| + | |species=human | ||
| + | |start=6261051 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000377893.2 NM_207370 uc001amp.2 BC068275 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_10006.1 | |tss_id=hg_10006.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=Q6NV75 | ||
}} | }} | ||
Revision as of 17:00, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000377893.2 NM_207370 uc001amp.2 BC068275 |
|---|---|
| Distance: | 77 |
| Num_trans: | 4 |
| All_trans: | ENST00000377893.2:77 NM_207370:77 uc001amp.2:77 BC068275:77 |
TATA-Box annotation
| Distance to TSS: | -108 |
|---|---|
| Nearest PromoterID: | NM_207370 |
| Entrez ID: | 387509 |
| Nearest Unigene: | Hs.531581 |
| Nearest Refseq: | NM_207370 |
| Nearest Ensembl: | ENSG00000158292 |
| Gene Name: | G protein-coupled receptor 153 |
| Gene Alias: | PGR1 |
| Gene Description: | G protein-coupled receptor 153 |
| Gene Type: | protein-coding |
| CpG%: | 0.175 |
| GC%: | 0.855721 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
