Difference between revisions of "TSS:Hg 100148.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.005 |distance_to_tss=-1316 |entrez_id=677776 |gc_percent=0.39801 |gene_alias=U92 |gene_description=small Cajal body-specific RNA 8 |gene_name=SCARNA...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=ENST00000415524.1:1 uc064she.1:1 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
| + | |distance=1 | ||
|distance_to_tss=-1316 | |distance_to_tss=-1316 | ||
| + | |end=19065120 | ||
|entrez_id=677776 | |entrez_id=677776 | ||
|gc_percent=0.39801 | |gc_percent=0.39801 | ||
|gene_alias=U92 | |gene_alias=U92 | ||
|gene_description=small Cajal body-specific RNA 8 | |gene_description=small Cajal body-specific RNA 8 | ||
| − | |gene_name= | + | |gene_id=54801 |
| + | |gene_name=HAUS augmin like complex subunit 6 | ||
| + | |gene_source=HGNC:25948 | ||
| + | |gene_symbol=HAUS6 | ||
| + | |gene_synonyms=FLJ20060 KIAA1574 dgt6 | ||
|gene_type=ncRNA | |gene_type=ncRNA | ||
| + | |hgnc_mgi_id=HGNC:25948 | ||
|nearest_ensembl=ENSG00000251733 | |nearest_ensembl=ENSG00000251733 | ||
|nearest_promoter_id=NR_003009 | |nearest_promoter_id=NR_003009 | ||
|nearest_refseq=NR_003009 | |nearest_refseq=NR_003009 | ||
|nearest_unigene=Hs.689635 | |nearest_unigene=Hs.689635 | ||
| + | |num_trans=2 | ||
| + | |species=human | ||
| + | |start=19065084 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000415524.1 uc064she.1 | ||
| + | |tss_classification=no | ||
|tss_id=hg_100148.1 | |tss_id=hg_100148.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=Q5SYF9 | ||
}} | }} | ||
Revision as of 17:02, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000415524.1 uc064she.1 |
|---|---|
| Distance: | 1 |
| Num_trans: | 2 |
| All_trans: | ENST00000415524.1:1 uc064she.1:1 |
TATA-Box annotation
| Distance to TSS: | -1316 |
|---|---|
| Nearest PromoterID: | NR_003009 |
| Entrez ID: | 677776 |
| Nearest Unigene: | Hs.689635 |
| Nearest Refseq: | NR_003009 |
| Nearest Ensembl: | ENSG00000251733 |
| Gene Name: | HAUS augmin like complex subunit 6 |
| Gene Alias: | U92 |
| Gene Description: | small Cajal body-specific RNA 8 |
| Gene Type: | ncRNA |
| CpG%: | 0.005 |
| GC%: | 0.39801 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
