Personal tools

Difference between revisions of "TSS:Hg 100161.1"

From referenceTSS

Jump to: navigation, search
(Created page with "{{TSSDetail |cpg_percent=0.02 |distance_to_tss=1748 |entrez_id=6194 |gc_percent=0.402985 |gene_alias=S6 |gene_description=ribosomal protein S6 |gene_name=RPS6 |gene_type=prote...")
 
Line 1: Line 1:
 
{{TSSDetail
 
{{TSSDetail
 +
|all_trans=AF274945:-323 BC035447:-404
 +
|chr=chr9
 
|cpg_percent=0.02
 
|cpg_percent=0.02
 +
|distance=-323
 
|distance_to_tss=1748
 
|distance_to_tss=1748
 +
|end=19378516
 
|entrez_id=6194
 
|entrez_id=6194
 
|gc_percent=0.402985
 
|gc_percent=0.402985
 
|gene_alias=S6
 
|gene_alias=S6
 
|gene_description=ribosomal protein S6
 
|gene_description=ribosomal protein S6
 +
|gene_id=
 
|gene_name=RPS6
 
|gene_name=RPS6
 
|gene_type=protein-coding
 
|gene_type=protein-coding
 +
|hgnc_mgi_id=
 
|nearest_ensembl=ENSG00000137154
 
|nearest_ensembl=ENSG00000137154
 
|nearest_promoter_id=NM_001010
 
|nearest_promoter_id=NM_001010
 
|nearest_refseq=NM_001010
 
|nearest_refseq=NM_001010
 
|nearest_unigene=Hs.408073
 
|nearest_unigene=Hs.408073
 +
|num_trans=2
 +
|species=human
 +
|start=19378461
 +
|strand=-
 +
|transcript_name=AF274945
 +
|tss_classification=no
 
|tss_id=hg_100161.1
 
|tss_id=hg_100161.1
 +
|tss_score=1
 +
|uniprot_id=Q9BZU1
 
}}
 
}}

Revision as of 17:02, 8 March 2018

Basic information about the TSS


TSS ID:hg_100161.1
Species:human
Chr:chr9
TSS Classification:no
Start:19378461
End:19378516
Strand:-
TSS Score:1
Start of the center position in the TSS region:
End of the center position in the TSS region:



Gene and protein annotation


Transcript_name:AF274945
Distance:-323
GeneID:
HGNC/MGI_ID:
UniProt_ID:Q9BZU1
Gene_name:RPS6
Gene_symbol:
Gene_synonyms:
Gene_source:



Transcript annotation


Transcript_name:AF274945
Distance:-323
Num_trans:2
All_trans:AF274945:-323 BC035447:-404



TATA-Box annotation


Distance to TSS:1748
Nearest PromoterID:NM_001010
Entrez ID:6194
Nearest Unigene:Hs.408073
Nearest Refseq:NM_001010
Nearest Ensembl:ENSG00000137154
Gene Name:RPS6
Gene Alias:S6
Gene Description:ribosomal protein S6
Gene Type:protein-coding
CpG%:0.02
GC%:0.402985
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):