Difference between revisions of "TSS:Hg 100163.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.03 |distance_to_tss=676 |entrez_id=6194 |gc_percent=0.442786 |gene_alias=S6 |gene_description=ribosomal protein S6 |gene_name=RPS6 |gene_type=protei...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=BC000524:-41 BC009427:-42 M20020:-43 J03537:-43 CU693282:-43 DQ891744:-43 KJ897500:-43 KJ897501:-43 DQ895025:-43 KJ905910:-43 AB529028:-43 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.03 | |cpg_percent=0.03 | ||
| + | |distance=-41 | ||
|distance_to_tss=676 | |distance_to_tss=676 | ||
| + | |end=19379577 | ||
|entrez_id=6194 | |entrez_id=6194 | ||
|gc_percent=0.442786 | |gc_percent=0.442786 | ||
|gene_alias=S6 | |gene_alias=S6 | ||
|gene_description=ribosomal protein S6 | |gene_description=ribosomal protein S6 | ||
| − | |gene_name=RPS6 | + | |gene_id=6194 |
| + | |gene_name=ribosomal protein S6 | ||
| + | |gene_source=HGNC:10429 | ||
| + | |gene_symbol=RPS6 | ||
| + | |gene_synonyms=S6 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:10429 | ||
|nearest_ensembl=ENSG00000137154 | |nearest_ensembl=ENSG00000137154 | ||
|nearest_promoter_id=NM_001010 | |nearest_promoter_id=NM_001010 | ||
|nearest_refseq=NM_001010 | |nearest_refseq=NM_001010 | ||
|nearest_unigene=Hs.408073 | |nearest_unigene=Hs.408073 | ||
| + | |num_trans=11 | ||
| + | |species=human | ||
| + | |start=19379545 | ||
| + | |strand=- | ||
| + | |transcript_name=BC000524 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_100163.1 | |tss_id=hg_100163.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 17:02, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | BC000524 |
|---|---|
| Distance: | -41 |
| Num_trans: | 11 |
| All_trans: | BC000524:-41 BC009427:-42 M20020:-43 J03537:-43 CU693282:-43 DQ891744:-43 KJ897500:-43 KJ897501:-43 DQ895025:-43 KJ905910:-43 AB529028:-43 |
TATA-Box annotation
| Distance to TSS: | 676 |
|---|---|
| Nearest PromoterID: | NM_001010 |
| Entrez ID: | 6194 |
| Nearest Unigene: | Hs.408073 |
| Nearest Refseq: | NM_001010 |
| Nearest Ensembl: | ENSG00000137154 |
| Gene Name: | ribosomal protein S6 |
| Gene Alias: | S6 |
| Gene Description: | ribosomal protein S6 |
| Gene Type: | protein-coding |
| CpG%: | 0.03 |
| GC%: | 0.442786 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
