Difference between revisions of "TSS:Hg 100180.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.12 |distance_to_tss=-2022 |entrez_id=25769 |gc_percent=0.781095 |gene_alias=NCKX2 |gene_description=solute carrier family 24 member 2 |gene_name=SLC...") |
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| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=DQ067463:221 DQ067462:420 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.12 | |cpg_percent=0.12 | ||
| + | |distance=221 | ||
|distance_to_tss=-2022 | |distance_to_tss=-2022 | ||
| + | |end=19789052 | ||
|entrez_id=25769 | |entrez_id=25769 | ||
|gc_percent=0.781095 | |gc_percent=0.781095 | ||
|gene_alias=NCKX2 | |gene_alias=NCKX2 | ||
|gene_description=solute carrier family 24 member 2 | |gene_description=solute carrier family 24 member 2 | ||
| − | |gene_name=SLC24A2 | + | |gene_id=25769 |
| + | |gene_name=solute carrier family 24 member 2 | ||
| + | |gene_source=HGNC:10976 | ||
| + | |gene_symbol=SLC24A2 | ||
| + | |gene_synonyms=NCKX2 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:10976 | ||
|nearest_ensembl=ENSG00000155886 | |nearest_ensembl=ENSG00000155886 | ||
|nearest_promoter_id=NM_001193288 | |nearest_promoter_id=NM_001193288 | ||
|nearest_refseq=NM_020344 | |nearest_refseq=NM_020344 | ||
|nearest_unigene=Hs.283014 | |nearest_unigene=Hs.283014 | ||
| + | |num_trans=2 | ||
| + | |species=human | ||
| + | |start=19789030 | ||
| + | |strand=- | ||
| + | |transcript_name=DQ067463 | ||
| + | |tss_classification=no | ||
|tss_id=hg_100180.1 | |tss_id=hg_100180.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 17:03, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | DQ067463 |
|---|---|
| Distance: | 221 |
| Num_trans: | 2 |
| All_trans: | DQ067463:221 DQ067462:420 |
TATA-Box annotation
| Distance to TSS: | -2022 |
|---|---|
| Nearest PromoterID: | NM_001193288 |
| Entrez ID: | 25769 |
| Nearest Unigene: | Hs.283014 |
| Nearest Refseq: | NM_020344 |
| Nearest Ensembl: | ENSG00000155886 |
| Gene Name: | solute carrier family 24 member 2 |
| Gene Alias: | NCKX2 |
| Gene Description: | solute carrier family 24 member 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.12 |
| GC%: | 0.781095 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
