Difference between revisions of "TSS:Hg 100189.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.005 |distance_to_tss=28766 |entrez_id=100616229 |gc_percent=0.412935 |gene_alias=- |gene_description=microRNA 4473 |gene_name=MIR4473 |gene_type=ncR...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=ENST00000380323.5:0 ENST00000488705.1:0 ENST00000380321.5:0 ENST00000491137.5:0 uc064sih.1:0 uc064sij.1:0 uc064sik.1:0 uc064sim.1:0 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
| + | |distance=0 | ||
|distance_to_tss=28766 | |distance_to_tss=28766 | ||
| + | |end=20382495 | ||
|entrez_id=100616229 | |entrez_id=100616229 | ||
|gc_percent=0.412935 | |gc_percent=0.412935 | ||
|gene_alias=- | |gene_alias=- | ||
|gene_description=microRNA 4473 | |gene_description=microRNA 4473 | ||
| − | |gene_name= | + | |gene_id=4300 |
| + | |gene_name="myeloid/lymphoid or mixed-lineage leukemia; translocated to, 3" | ||
| + | |gene_source=HGNC:7136 | ||
| + | |gene_symbol=MLLT3 | ||
| + | |gene_synonyms=AF-9 AF9 YEATS3 | ||
|gene_type=ncRNA | |gene_type=ncRNA | ||
| + | |hgnc_mgi_id=HGNC:7136 | ||
|nearest_ensembl=ENSG00000263790 | |nearest_ensembl=ENSG00000263790 | ||
|nearest_promoter_id=NR_039684 | |nearest_promoter_id=NR_039684 | ||
|nearest_refseq=NR_039684 | |nearest_refseq=NR_039684 | ||
|nearest_unigene= | |nearest_unigene= | ||
| + | |num_trans=8 | ||
| + | |species=human | ||
| + | |start=20382448 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000380323.5 ENST00000488705.1 ENST00000380321.5 ENST00000491137.5 uc064sih.1 uc064sij.1 uc064sik.1 uc064sim.1 | ||
| + | |tss_classification=no | ||
|tss_id=hg_100189.1 | |tss_id=hg_100189.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=B1APT5 | ||
}} | }} | ||
Revision as of 17:03, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000380323.5 ENST00000488705.1 ENST00000380321.5 ENST00000491137.5 uc064sih.1 uc064sij.1 uc064sik.1 uc064sim.1 |
|---|---|
| Distance: | 0 |
| Num_trans: | 8 |
| All_trans: | ENST00000380323.5:0 ENST00000488705.1:0 ENST00000380321.5:0 ENST00000491137.5:0 uc064sih.1:0 uc064sij.1:0 uc064sik.1:0 uc064sim.1:0 |
TATA-Box annotation
| Distance to TSS: | 28766 |
|---|---|
| Nearest PromoterID: | NR_039684 |
| Entrez ID: | 100616229 |
| Nearest Unigene: | |
| Nearest Refseq: | NR_039684 |
| Nearest Ensembl: | ENSG00000263790 |
| Gene Name: | "myeloid/lymphoid or mixed-lineage leukemia; translocated to, 3" |
| Gene Alias: | - |
| Gene Description: | microRNA 4473 |
| Gene Type: | ncRNA |
| CpG%: | 0.005 |
| GC%: | 0.412935 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
