Difference between revisions of "TSS:Hg 100199.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.07 |distance_to_tss=24 |entrez_id=4300 |gc_percent=0.597015 |gene_alias=AF9|YEATS3 |gene_description="MLLT3, super elongation complex subunit" |gene...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |YEATS3= | ||
| + | |all_trans=NM_001286691:0 ENST00000630269.2:56 uc011lnf.3:56 AK301474:56 KU178189:-259 KU178190:-259 AB463323:-260 CU690292:-262 KJ897192:-264 AK312914:-438 ENST00000475957.1:-443 uc064sin.1:-443 BC030550:-443 L13744:-454 AK225957:-481 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.07 | |cpg_percent=0.07 | ||
| + | |distance=0 | ||
|distance_to_tss=24 | |distance_to_tss=24 | ||
| + | |end=20621997 | ||
|entrez_id=4300 | |entrez_id=4300 | ||
|gc_percent=0.597015 | |gc_percent=0.597015 | ||
|gene_alias=AF9|YEATS3 | |gene_alias=AF9|YEATS3 | ||
|gene_description="MLLT3, super elongation complex subunit" | |gene_description="MLLT3, super elongation complex subunit" | ||
| − | |gene_name=MLLT3 | + | |gene_id=4300 |
| + | |gene_name="myeloid/lymphoid or mixed-lineage leukemia; translocated to, 3" | ||
| + | |gene_source=HGNC:7136 | ||
| + | |gene_symbol=MLLT3 | ||
| + | |gene_synonyms=AF-9 AF9 YEATS3 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:7136 | ||
|nearest_ensembl=ENSG00000171843 | |nearest_ensembl=ENSG00000171843 | ||
|nearest_promoter_id=NM_001286691 | |nearest_promoter_id=NM_001286691 | ||
|nearest_refseq=NM_004529 | |nearest_refseq=NM_004529 | ||
|nearest_unigene=Hs.317248 | |nearest_unigene=Hs.317248 | ||
| + | |num_trans=15 | ||
| + | |species=human | ||
| + | |start=20621928 | ||
| + | |strand=- | ||
| + | |transcript_name=NM_001286691 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_100199.1 | |tss_id=hg_100199.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=P42568 | ||
}} | }} | ||
Revision as of 17:03, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | NM_001286691 |
|---|---|
| Distance: | 0 |
| Num_trans: | 15 |
| All_trans: | NM_001286691:0 ENST00000630269.2:56 uc011lnf.3:56 AK301474:56 KU178189:-259 KU178190:-259 AB463323:-260 CU690292:-262 KJ897192:-264 AK312914:-438 ENST00000475957.1:-443 uc064sin.1:-443 BC030550:-443 L13744:-454 AK225957:-481 |
TATA-Box annotation
| Distance to TSS: | 24 |
|---|---|
| Nearest PromoterID: | NM_001286691 |
| Entrez ID: | 4300 |
| Nearest Unigene: | Hs.317248 |
| Nearest Refseq: | NM_004529 |
| Nearest Ensembl: | ENSG00000171843 |
| Gene Name: | "myeloid/lymphoid or mixed-lineage leukemia; translocated to, 3" |
| Gene Alias: | AF9 |
| Gene Description: | "MLLT3, super elongation complex subunit" |
| Gene Type: | protein-coding |
| CpG%: | 0.07 |
| GC%: | 0.597015 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
