Difference between revisions of "TSS:Hg 100298.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.03 |distance_to_tss=-174 |entrez_id=1993 |gc_percent=0.507463 |gene_alias=HEL-N1|HELN1|HUB |gene_description=ELAV like RNA binding protein 2 |gene_n...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |HELN1= | ||
| + | |HUB= | ||
| + | |all_trans=U12431:-57 U29943:-57 ENST00000462649.1:58 uc064skx.1:58 ENST00000380117.5:-91 uc003zpv.4:-91 ENST00000397312.6:167 NM_004432:167 uc003zpu.4:167 AB209294:167 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.03 | |cpg_percent=0.03 | ||
| + | |distance=-57 | ||
|distance_to_tss=-174 | |distance_to_tss=-174 | ||
| + | |end=23826246 | ||
|entrez_id=1993 | |entrez_id=1993 | ||
|gc_percent=0.507463 | |gc_percent=0.507463 | ||
| Line 12: | Line 18: | ||
|nearest_refseq=NM_004432 | |nearest_refseq=NM_004432 | ||
|nearest_unigene=Hs.166109 | |nearest_unigene=Hs.166109 | ||
| + | |num_trans=10 | ||
| + | |species=human | ||
| + | |start=23826231 | ||
| + | |strand=- | ||
|tata_box="-7(CCTTTTAAGACG,+,0.00)" | |tata_box="-7(CCTTTTAAGACG,+,0.00)" | ||
| + | |transcript_name=U12431 U29943 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_100298.1 | |tss_id=hg_100298.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Revision as of 17:05, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | U12431 U29943 |
|---|---|
| Distance: | -57 |
| Num_trans: | 10 |
| All_trans: | U12431:-57 U29943:-57 ENST00000462649.1:58 uc064skx.1:58 ENST00000380117.5:-91 uc003zpv.4:-91 ENST00000397312.6:167 NM_004432:167 uc003zpu.4:167 AB209294:167 |
TATA-Box annotation
| Distance to TSS: | -174 |
|---|---|
| Nearest PromoterID: | NM_004432 |
| Entrez ID: | 1993 |
| Nearest Unigene: | Hs.166109 |
| Nearest Refseq: | NM_004432 |
| Nearest Ensembl: | ENSG00000107105 |
| Gene Name: | ELAVL2 |
| Gene Alias: | HEL-N1 |
| Gene Description: | ELAV like RNA binding protein 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.03 |
| GC%: | 0.507463 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-7(CCTTTTAAGACG,+,0.00)" |
