Difference between revisions of "TSS:Hg 100338.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.005 |distance_to_tss=-102587 |entrez_id=56832 |gc_percent=0.487562 |gene_alias=IFNT1|INFE1 |gene_description=interferon kappa |gene_name=IFNK |gene_...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |INFE1= | ||
| + | |all_trans=ENST00000603061.1:1 uc064smj.1:1 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
| + | |distance=1 | ||
|distance_to_tss=-102587 | |distance_to_tss=-102587 | ||
| + | |end=27421740 | ||
|entrez_id=56832 | |entrez_id=56832 | ||
|gc_percent=0.487562 | |gc_percent=0.487562 | ||
|gene_alias=IFNT1|INFE1 | |gene_alias=IFNT1|INFE1 | ||
|gene_description=interferon kappa | |gene_description=interferon kappa | ||
| − | |gene_name= | + | |gene_id=79817 |
| + | |gene_name=MOB kinase activator 3B | ||
| + | |gene_source=HGNC:23825 | ||
| + | |gene_symbol=MOB3B | ||
| + | |gene_synonyms=FLJ13204 MOB1D | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:23825 | ||
|nearest_ensembl=ENSG00000147896 | |nearest_ensembl=ENSG00000147896 | ||
|nearest_promoter_id=NM_020124 | |nearest_promoter_id=NM_020124 | ||
|nearest_refseq=NM_020124 | |nearest_refseq=NM_020124 | ||
|nearest_unigene=Hs.591083 | |nearest_unigene=Hs.591083 | ||
| + | |num_trans=2 | ||
| + | |species=human | ||
| + | |start=27421714 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000603061.1 uc064smj.1 | ||
| + | |tss_classification=no | ||
|tss_id=hg_100338.1 | |tss_id=hg_100338.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 17:06, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000603061.1 uc064smj.1 |
|---|---|
| Distance: | 1 |
| Num_trans: | 2 |
| All_trans: | ENST00000603061.1:1 uc064smj.1:1 |
TATA-Box annotation
| Distance to TSS: | -102587 |
|---|---|
| Nearest PromoterID: | NM_020124 |
| Entrez ID: | 56832 |
| Nearest Unigene: | Hs.591083 |
| Nearest Refseq: | NM_020124 |
| Nearest Ensembl: | ENSG00000147896 |
| Gene Name: | MOB kinase activator 3B |
| Gene Alias: | IFNT1 |
| Gene Description: | interferon kappa |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.487562 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
