Difference between revisions of "TSS:Hg 100384.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.01 |distance_to_tss=5185 |entrez_id=23586 |gc_percent=0.38806 |gene_alias=RIG-I|RIGI|RLR-1|SGMRT2 |gene_description=DExD/H-box helicase 58 |gene_nam...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |RIGI= | ||
| + | |RLR-1= | ||
| + | |SGMRT2= | ||
| + | |chr=chr9 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
| + | |distance= | ||
|distance_to_tss=5185 | |distance_to_tss=5185 | ||
| + | |end=32521140 | ||
|entrez_id=23586 | |entrez_id=23586 | ||
|gc_percent=0.38806 | |gc_percent=0.38806 | ||
| Line 12: | Line 18: | ||
|nearest_refseq=NM_014314 | |nearest_refseq=NM_014314 | ||
|nearest_unigene=Hs.190622 | |nearest_unigene=Hs.190622 | ||
| + | |num_trans=0 | ||
| + | |species=human | ||
| + | |start=32521137 | ||
| + | |strand=- | ||
|tata_box="-78(AACCTTATAAGC,-,0.00),-76(CCTTATAAGCCG,+,0.00)" | |tata_box="-78(AACCTTATAAGC,-,0.00),-76(CCTTATAAGCCG,+,0.00)" | ||
| + | |transcript_name= | ||
| + | |tss_classification=no | ||
|tss_id=hg_100384.1 | |tss_id=hg_100384.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Revision as of 17:07, 8 March 2018
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | 5185 |
|---|---|
| Nearest PromoterID: | NM_014314 |
| Entrez ID: | 23586 |
| Nearest Unigene: | Hs.190622 |
| Nearest Refseq: | NM_014314 |
| Nearest Ensembl: | ENSG00000107201 |
| Gene Name: | DDX58 |
| Gene Alias: | RIG-I |
| Gene Description: | DExD/H-box helicase 58 |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.38806 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-78(AACCTTATAAGC,-,0.00),-76(CCTTATAAGCCG,+,0.00)" |
