Difference between revisions of "TSS:Hg 100432.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.03 |distance_to_tss=-31606 |entrez_id=101929639 |gc_percent=0.557214 |gene_alias=- |gene_description=B4GALT1 antisense RNA 1 |gene_name=B4GALT1-AS1...") |
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| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=BX648438:12 M13701:-75 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.03 | |cpg_percent=0.03 | ||
| + | |distance=12 | ||
|distance_to_tss=-31606 | |distance_to_tss=-31606 | ||
| + | |end=33135350 | ||
|entrez_id=101929639 | |entrez_id=101929639 | ||
|gc_percent=0.557214 | |gc_percent=0.557214 | ||
|gene_alias=- | |gene_alias=- | ||
|gene_description=B4GALT1 antisense RNA 1 | |gene_description=B4GALT1 antisense RNA 1 | ||
| − | |gene_name=B4GALT1- | + | |gene_id=2683 |
| + | |gene_name="beta-1,4-galactosyltransferase 1" | ||
| + | |gene_source=HGNC:924 | ||
| + | |gene_symbol=B4GALT1 | ||
| + | |gene_synonyms=beta4Gal-T1 | ||
|gene_type=ncRNA | |gene_type=ncRNA | ||
| + | |hgnc_mgi_id=HGNC:924 | ||
|nearest_ensembl=ENSG00000233554 | |nearest_ensembl=ENSG00000233554 | ||
|nearest_promoter_id=NR_108110 | |nearest_promoter_id=NR_108110 | ||
|nearest_refseq=NR_108108 | |nearest_refseq=NR_108108 | ||
|nearest_unigene=Hs.545818 | |nearest_unigene=Hs.545818 | ||
| + | |num_trans=2 | ||
| + | |species=human | ||
| + | |start=33135333 | ||
| + | |strand=- | ||
| + | |transcript_name=BX648438 | ||
| + | |tss_classification=no | ||
|tss_id=hg_100432.1 | |tss_id=hg_100432.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 17:08, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | BX648438 |
|---|---|
| Distance: | 12 |
| Num_trans: | 2 |
| All_trans: | BX648438:12 M13701:-75 |
TATA-Box annotation
| Distance to TSS: | -31606 |
|---|---|
| Nearest PromoterID: | NR_108110 |
| Entrez ID: | 101929639 |
| Nearest Unigene: | Hs.545818 |
| Nearest Refseq: | NR_108108 |
| Nearest Ensembl: | ENSG00000233554 |
| Gene Name: | "beta-1,4-galactosyltransferase 1" |
| Gene Alias: | - |
| Gene Description: | B4GALT1 antisense RNA 1 |
| Gene Type: | ncRNA |
| CpG%: | 0.03 |
| GC%: | 0.557214 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
