Difference between revisions of "TSS:Hg 100451.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.125 |distance_to_tss=50 |entrez_id=573 |gc_percent=0.756219 |gene_alias=BAG-1|HAP|RAP46 |gene_description=BCL2 associated athanogene 1 |gene_name=BA...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |HAP= | ||
| + | |RAP46= | ||
| + | |all_trans=ENST00000379707.7:0 ENST00000635077.1:0 BC001936:0 Z35491:0 AF116273:0 AF022224:0 U46917:0 AK222749:0 AK316577:0 uc064sor.1:2 ENST00000634734.1:5 ENST00000488499.1:9 uc064sow.1:9 ENST00000472232.7:-18 NM_001172415:-18 NM_004323:-18 uc064soo.1:-18 uc064sos.1:-20 AK096038:29 ENST00000379704.7:108 BC014774:108 ENST00000473781.1:120 uc064sov.1:120 KJ890753:218 AM392568:218 KU177932:218 KU177933:218 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.125 | |cpg_percent=0.125 | ||
| + | |distance=0 | ||
|distance_to_tss=50 | |distance_to_tss=50 | ||
| + | |end=33264743 | ||
|entrez_id=573 | |entrez_id=573 | ||
|gc_percent=0.756219 | |gc_percent=0.756219 | ||
|gene_alias=BAG-1|HAP|RAP46 | |gene_alias=BAG-1|HAP|RAP46 | ||
|gene_description=BCL2 associated athanogene 1 | |gene_description=BCL2 associated athanogene 1 | ||
| − | |gene_name=BAG1 | + | |gene_id=573 |
| + | |gene_name=BCL2 associated athanogene 1 | ||
| + | |gene_source=HGNC:937 | ||
| + | |gene_symbol=BAG1 | ||
| + | |gene_synonyms= | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:937 | ||
|nearest_ensembl=ENSG00000107262 | |nearest_ensembl=ENSG00000107262 | ||
|nearest_promoter_id=NM_001172415 | |nearest_promoter_id=NM_001172415 | ||
|nearest_refseq=NM_004323 | |nearest_refseq=NM_004323 | ||
|nearest_unigene=Hs.377484 | |nearest_unigene=Hs.377484 | ||
| + | |num_trans=27 | ||
| + | |species=human | ||
| + | |start=33264678 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000379707.7 ENST00000635077.1 BC001936 Z35491 AF116273 AF022224 U46917 AK222749 AK316577 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_100451.1 | |tss_id=hg_100451.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=F1LLU6 | ||
}} | }} | ||
Revision as of 17:09, 8 March 2018
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000379707.7 ENST00000635077.1 BC001936 Z35491 AF116273 AF022224 U46917 AK222749 AK316577 |
|---|---|
| Distance: | 0 |
| Num_trans: | 27 |
| All_trans: | ENST00000379707.7:0 ENST00000635077.1:0 BC001936:0 Z35491:0 AF116273:0 AF022224:0 U46917:0 AK222749:0 AK316577:0 uc064sor.1:2 ENST00000634734.1:5 ENST00000488499.1:9 uc064sow.1:9 ENST00000472232.7:-18 NM_001172415:-18 NM_004323:-18 uc064soo.1:-18 uc064sos.1:-20 AK096038:29 ENST00000379704.7:108 BC014774:108 ENST00000473781.1:120 uc064sov.1:120 KJ890753:218 AM392568:218 KU177932:218 KU177933:218 |
TATA-Box annotation
| Distance to TSS: | 50 |
|---|---|
| Nearest PromoterID: | NM_001172415 |
| Entrez ID: | 573 |
| Nearest Unigene: | Hs.377484 |
| Nearest Refseq: | NM_004323 |
| Nearest Ensembl: | ENSG00000107262 |
| Gene Name: | BCL2 associated athanogene 1 |
| Gene Alias: | BAG-1 |
| Gene Description: | BCL2 associated athanogene 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.125 |
| GC%: | 0.756219 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
