Difference between revisions of "TSS:Hg 100458.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.025 |distance_to_tss=126 |entrez_id=364 |gc_percent=0.636816 |gene_alias=AQP7L|AQPap|GLYCQTL |gene_description=aquaporin 7 |gene_name=AQP7 |gene_typ...") |
|||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |AQPap= | ||
| + | |GLYCQTL= | ||
| + | |all_trans=ENST00000623097.3:0 uc064spd.1:0 ENST00000624075.3:-15 uc011lnx.2:-15 AK297860:-15 ENST00000297988.5:23 uc003zst.3:23 AB006190:23 ENST00000537089.5:28 uc064spc.1:28 BC119672:28 BC119673:28 ENST00000377425.8:34 uc003zsu.2:34 BC062701:34 ENST00000624890.3:46 uc064spg.1:46 AK297885:46 ENST00000625032.1:-74 uc064spo.1:-74 AK301949:-74 ENST00000624420.3:76 uc064spj.1:76 AK294028:76 ENST00000623519.1:-81 uc064spp.1:-81 ENST00000625109.3:-109 uc064spl.1:-109 ENST00000624005.3:-111 NM_001170:-111 NM_001318156:-111 NM_001318157:-111 NM_001318158:-111 NR_134513:-111 NR_134514:-111 NR_134515:-111 uc064sph.1:-111 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.025 | |cpg_percent=0.025 | ||
| + | |distance=0 | ||
|distance_to_tss=126 | |distance_to_tss=126 | ||
| + | |end=33402571 | ||
|entrez_id=364 | |entrez_id=364 | ||
|gc_percent=0.636816 | |gc_percent=0.636816 | ||
|gene_alias=AQP7L|AQPap|GLYCQTL | |gene_alias=AQP7L|AQPap|GLYCQTL | ||
|gene_description=aquaporin 7 | |gene_description=aquaporin 7 | ||
| − | |gene_name=AQP7 | + | |gene_id=364 |
| + | |gene_name=aquaporin 7 | ||
| + | |gene_source=HGNC:640 | ||
| + | |gene_symbol=AQP7 | ||
| + | |gene_synonyms=AQP9 AQPap | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:640 | ||
|nearest_ensembl=ENSG00000165269 | |nearest_ensembl=ENSG00000165269 | ||
|nearest_promoter_id=NM_001318157 | |nearest_promoter_id=NM_001318157 | ||
|nearest_refseq=NM_001170 | |nearest_refseq=NM_001170 | ||
|nearest_unigene=Hs.455323 | |nearest_unigene=Hs.455323 | ||
| + | |num_trans=37 | ||
| + | |species=human | ||
| + | |start=33402541 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000623097.3 uc064spd.1 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_100458.1 | |tss_id=hg_100458.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 17:09, 8 March 2018
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000623097.3 uc064spd.1 |
|---|---|
| Distance: | 0 |
| Num_trans: | 37 |
| All_trans: | ENST00000623097.3:0 uc064spd.1:0 ENST00000624075.3:-15 uc011lnx.2:-15 AK297860:-15 ENST00000297988.5:23 uc003zst.3:23 AB006190:23 ENST00000537089.5:28 uc064spc.1:28 BC119672:28 BC119673:28 ENST00000377425.8:34 uc003zsu.2:34 BC062701:34 ENST00000624890.3:46 uc064spg.1:46 AK297885:46 ENST00000625032.1:-74 uc064spo.1:-74 AK301949:-74 ENST00000624420.3:76 uc064spj.1:76 AK294028:76 ENST00000623519.1:-81 uc064spp.1:-81 ENST00000625109.3:-109 uc064spl.1:-109 ENST00000624005.3:-111 NM_001170:-111 NM_001318156:-111 NM_001318157:-111 NM_001318158:-111 NR_134513:-111 NR_134514:-111 NR_134515:-111 uc064sph.1:-111 |
TATA-Box annotation
| Distance to TSS: | 126 |
|---|---|
| Nearest PromoterID: | NM_001318157 |
| Entrez ID: | 364 |
| Nearest Unigene: | Hs.455323 |
| Nearest Refseq: | NM_001170 |
| Nearest Ensembl: | ENSG00000165269 |
| Gene Name: | aquaporin 7 |
| Gene Alias: | AQP7L |
| Gene Description: | aquaporin 7 |
| Gene Type: | protein-coding |
| CpG%: | 0.025 |
| GC%: | 0.636816 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
