Difference between revisions of "TSS:Hg 100475.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.05 |distance_to_tss=36 |entrez_id=65083 |gc_percent=0.587065 |gene_alias=NRAP|UTP22|bA311H10.1 |gene_description=nucleolar protein 6 |gene_name=NOL6...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |UTP22= | ||
| + | |all_trans=ENST00000464829.5:0 uc064spw.1:0 AK026258:0 AK293969:0 BC020450:0 ENST00000353159.6:-1 ENST00000297990.8:-1 ENST00000379471.3:-1 uc003zta.4:-1 uc003zsz.4:-1 uc064spv.1:-1 AF361081:11 AF361079:11 AF361080:11 NM_139235:-14 NM_022917:-14 BC030139:29 | ||
| + | |bA311H10.1= | ||
| + | |chr=chr9 | ||
|cpg_percent=0.05 | |cpg_percent=0.05 | ||
| + | |distance=0 | ||
|distance_to_tss=36 | |distance_to_tss=36 | ||
| + | |end=33473929 | ||
|entrez_id=65083 | |entrez_id=65083 | ||
|gc_percent=0.587065 | |gc_percent=0.587065 | ||
|gene_alias=NRAP|UTP22|bA311H10.1 | |gene_alias=NRAP|UTP22|bA311H10.1 | ||
|gene_description=nucleolar protein 6 | |gene_description=nucleolar protein 6 | ||
| − | |gene_name=NOL6 | + | |gene_id=65083 |
| + | |gene_name=nucleolar protein 6 | ||
| + | |gene_source=HGNC:19910 | ||
| + | |gene_symbol=NOL6 | ||
| + | |gene_synonyms=FLJ21959 MGC14896 MGC14921 MGC20838 Nrap UTP22 bA311H10.1 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:19910 | ||
|nearest_ensembl=ENSG00000165271 | |nearest_ensembl=ENSG00000165271 | ||
|nearest_promoter_id=NM_022917 | |nearest_promoter_id=NM_022917 | ||
|nearest_refseq=NM_022917 | |nearest_refseq=NM_022917 | ||
|nearest_unigene=Hs.493709 | |nearest_unigene=Hs.493709 | ||
| + | |num_trans=17 | ||
| + | |species=human | ||
| + | |start=33473884 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000464829.5 uc064spw.1 AK026258 AK293969 BC020450 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_100475.1 | |tss_id=hg_100475.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=B4DF80 | ||
}} | }} | ||
Revision as of 17:09, 8 March 2018
Basic information about the TSS
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|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000464829.5 uc064spw.1 AK026258 AK293969 BC020450 |
|---|---|
| Distance: | 0 |
| Num_trans: | 17 |
| All_trans: | ENST00000464829.5:0 uc064spw.1:0 AK026258:0 AK293969:0 BC020450:0 ENST00000353159.6:-1 ENST00000297990.8:-1 ENST00000379471.3:-1 uc003zta.4:-1 uc003zsz.4:-1 uc064spv.1:-1 AF361081:11 AF361079:11 AF361080:11 NM_139235:-14 NM_022917:-14 BC030139:29 |
TATA-Box annotation
| Distance to TSS: | 36 |
|---|---|
| Nearest PromoterID: | NM_022917 |
| Entrez ID: | 65083 |
| Nearest Unigene: | Hs.493709 |
| Nearest Refseq: | NM_022917 |
| Nearest Ensembl: | ENSG00000165271 |
| Gene Name: | nucleolar protein 6 |
| Gene Alias: | NRAP |
| Gene Description: | nucleolar protein 6 |
| Gene Type: | protein-coding |
| CpG%: | 0.05 |
| GC%: | 0.587065 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
