Difference between revisions of "TSS:Hg 100489.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.09 |distance_to_tss=159 |entrez_id=25853 |gc_percent=0.631841 |gene_alias=CT102|KIAA1892|TCC52|WDR40A |gene_description=DDB1 and CUL4 associated fac...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |KIAA1892= | ||
| + | |TCC52= | ||
| + | |WDR40A= | ||
| + | |all_trans=AK292935:30 AK000354:57 BC063823:-72 AB067479:-74 DQ518909:-74 ENST00000361264.8:-154 NM_015397:-154 uc003ztt.3:-154 KJ898559:174 AB384317:178 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.09 | |cpg_percent=0.09 | ||
| + | |distance=30 | ||
|distance_to_tss=159 | |distance_to_tss=159 | ||
| + | |end=34126619 | ||
|entrez_id=25853 | |entrez_id=25853 | ||
|gc_percent=0.631841 | |gc_percent=0.631841 | ||
|gene_alias=CT102|KIAA1892|TCC52|WDR40A | |gene_alias=CT102|KIAA1892|TCC52|WDR40A | ||
|gene_description=DDB1 and CUL4 associated factor 12 | |gene_description=DDB1 and CUL4 associated factor 12 | ||
| − | |gene_name=DCAF12 | + | |gene_id=25853 |
| + | |gene_name=DDB1 and CUL4 associated factor 12 | ||
| + | |gene_source=HGNC:19911 | ||
| + | |gene_symbol=DCAF12 | ||
| + | |gene_synonyms=CT102 DKFZP434O125 MGC1058 TCC52 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:19911 | ||
|nearest_ensembl=ENSG00000198876 | |nearest_ensembl=ENSG00000198876 | ||
|nearest_promoter_id=NM_015397 | |nearest_promoter_id=NM_015397 | ||
|nearest_refseq=NM_015397 | |nearest_refseq=NM_015397 | ||
|nearest_unigene=Hs.493750 | |nearest_unigene=Hs.493750 | ||
| + | |num_trans=10 | ||
| + | |species=human | ||
| + | |start=34126608 | ||
| + | |strand=- | ||
| + | |transcript_name=AK292935 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_100489.1 | |tss_id=hg_100489.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 17:10, 8 March 2018
Basic information about the TSS
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|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AK292935 |
|---|---|
| Distance: | 30 |
| Num_trans: | 10 |
| All_trans: | AK292935:30 AK000354:57 BC063823:-72 AB067479:-74 DQ518909:-74 ENST00000361264.8:-154 NM_015397:-154 uc003ztt.3:-154 KJ898559:174 AB384317:178 |
TATA-Box annotation
| Distance to TSS: | 159 |
|---|---|
| Nearest PromoterID: | NM_015397 |
| Entrez ID: | 25853 |
| Nearest Unigene: | Hs.493750 |
| Nearest Refseq: | NM_015397 |
| Nearest Ensembl: | ENSG00000198876 |
| Gene Name: | DDB1 and CUL4 associated factor 12 |
| Gene Alias: | CT102 |
| Gene Description: | DDB1 and CUL4 associated factor 12 |
| Gene Type: | protein-coding |
| CpG%: | 0.09 |
| GC%: | 0.631841 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
