Difference between revisions of "TSS:Hg 100553.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.005 |distance_to_tss=13 |entrez_id=100129969 |gc_percent=0.452736 |gene_alias=FAM205CP |gene_description=family with sequence similarity 205 member...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=ENST00000603592.1:0 ENST00000340783.10:-7 NM_001309426:-7 NM_001309427:-7 ENST00000603640.6:37 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
| + | |distance=0 | ||
|distance_to_tss=13 | |distance_to_tss=13 | ||
| + | |end=34895771 | ||
|entrez_id=100129969 | |entrez_id=100129969 | ||
|gc_percent=0.452736 | |gc_percent=0.452736 | ||
|gene_alias=FAM205CP | |gene_alias=FAM205CP | ||
|gene_description=family with sequence similarity 205 member C | |gene_description=family with sequence similarity 205 member C | ||
| − | |gene_name=FAM205C | + | |gene_id=100129969 |
| + | |gene_name=family with sequence similarity 205 member C | ||
| + | |gene_source=HGNC:42673 | ||
| + | |gene_symbol=FAM205C | ||
| + | |gene_synonyms= | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:42673 | ||
|nearest_ensembl=ENSG00000187791 | |nearest_ensembl=ENSG00000187791 | ||
|nearest_promoter_id=NM_001309427 | |nearest_promoter_id=NM_001309427 | ||
|nearest_refseq=NM_001309426 | |nearest_refseq=NM_001309426 | ||
|nearest_unigene=Hs.571602 | |nearest_unigene=Hs.571602 | ||
| + | |num_trans=5 | ||
| + | |species=human | ||
| + | |start=34895758 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000603592.1 | ||
| + | |tss_classification=no | ||
|tss_id=hg_100553.1 | |tss_id=hg_100553.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 17:11, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000603592.1 |
|---|---|
| Distance: | 0 |
| Num_trans: | 5 |
| All_trans: | ENST00000603592.1:0 ENST00000340783.10:-7 NM_001309426:-7 NM_001309427:-7 ENST00000603640.6:37 |
TATA-Box annotation
| Distance to TSS: | 13 |
|---|---|
| Nearest PromoterID: | NM_001309427 |
| Entrez ID: | 100129969 |
| Nearest Unigene: | Hs.571602 |
| Nearest Refseq: | NM_001309426 |
| Nearest Ensembl: | ENSG00000187791 |
| Gene Name: | family with sequence similarity 205 member C |
| Gene Alias: | FAM205CP |
| Gene Description: | family with sequence similarity 205 member C |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.452736 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
