Difference between revisions of "TSS:Hg 100565.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.105 |distance_to_tss=17 |entrez_id=2189 |gc_percent=0.716418 |gene_alias=FAG|XRCC9 |gene_description=Fanconi anemia complementation group G |gene_na...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |XRCC9= | ||
| + | |all_trans=ENST00000378643.7:-5 NM_004629:-5 uc003zwb.1:-5 AJ007669:-5 KU159422:-36 ENST00000448890.1:45 uc064svy.1:45 AK312987:46 AK293427:86 BC011623:198 ENST00000425676.5:294 uc064svu.1:294 AK311348:294 ENST00000462124.1:318 uc064swa.1:318 BC000032:325 U70310:329 DQ892166:458 DQ895360:458 AB464437:461 KJ891145:462 KR709811:462 KR709812:462 KR709813:462 CU674000:462 BT009813:463 KU178053:463 KU178054:463 KU178055:463 KU178056:463 KU178057:463 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.105 | |cpg_percent=0.105 | ||
| + | |distance=-5 | ||
|distance_to_tss=17 | |distance_to_tss=17 | ||
| + | |end=35080011 | ||
|entrez_id=2189 | |entrez_id=2189 | ||
|gc_percent=0.716418 | |gc_percent=0.716418 | ||
|gene_alias=FAG|XRCC9 | |gene_alias=FAG|XRCC9 | ||
|gene_description=Fanconi anemia complementation group G | |gene_description=Fanconi anemia complementation group G | ||
| − | |gene_name=FANCG | + | |gene_id=2189 |
| + | |gene_name=Fanconi anemia complementation group G | ||
| + | |gene_source=HGNC:3588 | ||
| + | |gene_symbol=FANCG | ||
| + | |gene_synonyms=FAG | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:3588 | ||
|nearest_ensembl=ENSG00000221829 | |nearest_ensembl=ENSG00000221829 | ||
|nearest_promoter_id=NM_004629 | |nearest_promoter_id=NM_004629 | ||
|nearest_refseq=NM_004629 | |nearest_refseq=NM_004629 | ||
|nearest_unigene=Hs.591084 | |nearest_unigene=Hs.591084 | ||
| + | |num_trans=31 | ||
| + | |species=human | ||
| + | |start=35079986 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000378643.7 NM_004629 uc003zwb.1 AJ007669 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_100565.1 | |tss_id=hg_100565.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=Q53XM5 | ||
}} | }} | ||
Revision as of 17:11, 8 March 2018
Basic information about the TSS
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|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000378643.7 NM_004629 uc003zwb.1 AJ007669 |
|---|---|
| Distance: | -5 |
| Num_trans: | 31 |
| All_trans: | ENST00000378643.7:-5 NM_004629:-5 uc003zwb.1:-5 AJ007669:-5 KU159422:-36 ENST00000448890.1:45 uc064svy.1:45 AK312987:46 AK293427:86 BC011623:198 ENST00000425676.5:294 uc064svu.1:294 AK311348:294 ENST00000462124.1:318 uc064swa.1:318 BC000032:325 U70310:329 DQ892166:458 DQ895360:458 AB464437:461 KJ891145:462 KR709811:462 KR709812:462 KR709813:462 CU674000:462 BT009813:463 KU178053:463 KU178054:463 KU178055:463 KU178056:463 KU178057:463 |
TATA-Box annotation
| Distance to TSS: | 17 |
|---|---|
| Nearest PromoterID: | NM_004629 |
| Entrez ID: | 2189 |
| Nearest Unigene: | Hs.591084 |
| Nearest Refseq: | NM_004629 |
| Nearest Ensembl: | ENSG00000221829 |
| Gene Name: | Fanconi anemia complementation group G |
| Gene Alias: | FAG |
| Gene Description: | Fanconi anemia complementation group G |
| Gene Type: | protein-coding |
| CpG%: | 0.105 |
| GC%: | 0.716418 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
