Difference between revisions of "TSS:Hg 100567.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.085 |distance_to_tss=2 |entrez_id=84720 |gc_percent=0.676617 |gene_alias=HPMRS2 |gene_description=phosphatidylinositol glycan anchor biosynthesis cl...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=ENST00000361778.6:0 ENST00000465745.6:0 ENST00000492770.1:0 NM_152850:0 uc003zwf.4:0 uc064swb.1:0 uc064swe.1:0 AK074064:0 ENST00000474436.1:8 uc003zwc.2:8 AK090433:8 NM_032634:9 NM_001201484:9 ENST00000378617.3:10 uc003zwd.4:10 AL833956:10 ENST00000472208.1:304 uc064swd.1:304 ENST00000298004.9:338 uc003zwe.4:338 BC065282:338 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.085 | |cpg_percent=0.085 | ||
| + | |distance=0 | ||
|distance_to_tss=2 | |distance_to_tss=2 | ||
| + | |end=35096640 | ||
|entrez_id=84720 | |entrez_id=84720 | ||
|gc_percent=0.676617 | |gc_percent=0.676617 | ||
|gene_alias=HPMRS2 | |gene_alias=HPMRS2 | ||
|gene_description=phosphatidylinositol glycan anchor biosynthesis class O | |gene_description=phosphatidylinositol glycan anchor biosynthesis class O | ||
| − | |gene_name=PIGO | + | |gene_id=84720 |
| + | |gene_name=phosphatidylinositol glycan anchor biosynthesis class O | ||
| + | |gene_source=HGNC:23215 | ||
| + | |gene_symbol=PIGO | ||
| + | |gene_synonyms=DKFZp434M222 FLJ00135 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:23215 | ||
|nearest_ensembl=ENSG00000165282 | |nearest_ensembl=ENSG00000165282 | ||
|nearest_promoter_id=NM_152850 | |nearest_promoter_id=NM_152850 | ||
|nearest_refseq=NM_032634 | |nearest_refseq=NM_032634 | ||
|nearest_unigene=Hs.522099 | |nearest_unigene=Hs.522099 | ||
| + | |num_trans=21 | ||
| + | |species=human | ||
| + | |start=35096557 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000361778.6 ENST00000465745.6 ENST00000492770.1 NM_152850 uc003zwf.4 uc064swb.1 uc064swe.1 AK074064 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_100567.1 | |tss_id=hg_100567.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=Q8TEQ8 | ||
}} | }} | ||
Revision as of 17:11, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000361778.6 ENST00000465745.6 ENST00000492770.1 NM_152850 uc003zwf.4 uc064swb.1 uc064swe.1 AK074064 |
|---|---|
| Distance: | 0 |
| Num_trans: | 21 |
| All_trans: | ENST00000361778.6:0 ENST00000465745.6:0 ENST00000492770.1:0 NM_152850:0 uc003zwf.4:0 uc064swb.1:0 uc064swe.1:0 AK074064:0 ENST00000474436.1:8 uc003zwc.2:8 AK090433:8 NM_032634:9 NM_001201484:9 ENST00000378617.3:10 uc003zwd.4:10 AL833956:10 ENST00000472208.1:304 uc064swd.1:304 ENST00000298004.9:338 uc003zwe.4:338 BC065282:338 |
TATA-Box annotation
| Distance to TSS: | 2 |
|---|---|
| Nearest PromoterID: | NM_152850 |
| Entrez ID: | 84720 |
| Nearest Unigene: | Hs.522099 |
| Nearest Refseq: | NM_032634 |
| Nearest Ensembl: | ENSG00000165282 |
| Gene Name: | phosphatidylinositol glycan anchor biosynthesis class O |
| Gene Alias: | HPMRS2 |
| Gene Description: | phosphatidylinositol glycan anchor biosynthesis class O |
| Gene Type: | protein-coding |
| CpG%: | 0.085 |
| GC%: | 0.676617 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
