Difference between revisions of "TSS:Hg 100589.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.025 |distance_to_tss=-28 |entrez_id=971 |gc_percent=0.567164 |gene_alias=CD72b|LYB2 |gene_description=CD72 molecule |gene_name=CD72 |gene_type=prote...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |LYB2= | ||
| + | |all_trans=ENST00000259633.8:24 NM_001782:24 uc003zxb.2:24 ENST00000490239.5:38 uc064sxf.1:38 AF283777:38 M54992:40 AK310685:51 AK310093:57 ENST00000378430.3:62 uc064sxl.1:62 AK307305:62 ENST00000482121.1:75 uc064sxk.1:75 AK309268:78 ENST00000378431.5:81 uc010mkv.3:81 BC030227:83 ENST00000477364.5:96 uc064sxh.1:96 ENST00000463720.5:98 uc064sxg.1:98 BC011734:102 KJ890871:147 CU688854:147 AB209587:-297 ENST00000612238.4:-352 uc064sxe.1:-352 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.025 | |cpg_percent=0.025 | ||
| + | |distance=24 | ||
|distance_to_tss=-28 | |distance_to_tss=-28 | ||
| + | |end=35618459 | ||
|entrez_id=971 | |entrez_id=971 | ||
|gc_percent=0.567164 | |gc_percent=0.567164 | ||
|gene_alias=CD72b|LYB2 | |gene_alias=CD72b|LYB2 | ||
|gene_description=CD72 molecule | |gene_description=CD72 molecule | ||
| − | |gene_name=CD72 | + | |gene_id=971 |
| + | |gene_name=CD72 molecule | ||
| + | |gene_source=HGNC:1696 | ||
| + | |gene_symbol=CD72 | ||
| + | |gene_synonyms=CD72b LYB2 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:1696 | ||
|nearest_ensembl=ENSG00000137101 | |nearest_ensembl=ENSG00000137101 | ||
|nearest_promoter_id=NM_001782 | |nearest_promoter_id=NM_001782 | ||
|nearest_refseq=NM_001782 | |nearest_refseq=NM_001782 | ||
|nearest_unigene=Hs.116481 | |nearest_unigene=Hs.116481 | ||
| + | |num_trans=28 | ||
| + | |species=human | ||
| + | |start=35618450 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000259633.8 NM_001782 uc003zxb.2 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_100589.1 | |tss_id=hg_100589.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=Q5TLG3 | ||
}} | }} | ||
Revision as of 17:12, 8 March 2018
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000259633.8 NM_001782 uc003zxb.2 |
|---|---|
| Distance: | 24 |
| Num_trans: | 28 |
| All_trans: | ENST00000259633.8:24 NM_001782:24 uc003zxb.2:24 ENST00000490239.5:38 uc064sxf.1:38 AF283777:38 M54992:40 AK310685:51 AK310093:57 ENST00000378430.3:62 uc064sxl.1:62 AK307305:62 ENST00000482121.1:75 uc064sxk.1:75 AK309268:78 ENST00000378431.5:81 uc010mkv.3:81 BC030227:83 ENST00000477364.5:96 uc064sxh.1:96 ENST00000463720.5:98 uc064sxg.1:98 BC011734:102 KJ890871:147 CU688854:147 AB209587:-297 ENST00000612238.4:-352 uc064sxe.1:-352 |
TATA-Box annotation
| Distance to TSS: | -28 |
|---|---|
| Nearest PromoterID: | NM_001782 |
| Entrez ID: | 971 |
| Nearest Unigene: | Hs.116481 |
| Nearest Refseq: | NM_001782 |
| Nearest Ensembl: | ENSG00000137101 |
| Gene Name: | CD72 molecule |
| Gene Alias: | CD72b |
| Gene Description: | CD72 molecule |
| Gene Type: | protein-coding |
| CpG%: | 0.025 |
| GC%: | 0.567164 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
