Difference between revisions of "TSS:Hg 100601.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.035 |distance_to_tss=1 |entrez_id=6023 |gc_percent=0.492537 |gene_alias=CHH|NME1|RMRPR|RRP2 |gene_description=RNA component of mitochondrial RNA pro...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |NME1= | ||
| + | |RMRPR= | ||
| + | |RRP2= | ||
| + | |all_trans=ENST00000602361.1:0 ENST00000363046.1:0 NR_003051:0 uc003zxh.2:0 uc064sxr.1:0 M29212:0 AF458223:0 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.035 | |cpg_percent=0.035 | ||
| + | |distance=0 | ||
|distance_to_tss=1 | |distance_to_tss=1 | ||
| + | |end=35658024 | ||
|entrez_id=6023 | |entrez_id=6023 | ||
|gc_percent=0.492537 | |gc_percent=0.492537 | ||
|gene_alias=CHH|NME1|RMRPR|RRP2 | |gene_alias=CHH|NME1|RMRPR|RRP2 | ||
|gene_description=RNA component of mitochondrial RNA processing endoribonuclease | |gene_description=RNA component of mitochondrial RNA processing endoribonuclease | ||
| − | |gene_name=RMRP | + | |gene_id=6023 |
| + | |gene_name=RNA component of mitochondrial RNA processing endoribonuclease | ||
| + | |gene_source=HGNC:10031 | ||
| + | |gene_symbol=RMRP | ||
| + | |gene_synonyms=NME1 RMRPR RRP2 | ||
|gene_type=ncRNA | |gene_type=ncRNA | ||
| + | |hgnc_mgi_id=HGNC:10031 | ||
|nearest_ensembl=ENSG00000269900 | |nearest_ensembl=ENSG00000269900 | ||
|nearest_promoter_id=NR_003051 | |nearest_promoter_id=NR_003051 | ||
|nearest_refseq=NR_003051 | |nearest_refseq=NR_003051 | ||
|nearest_unigene=Hs.587502 | |nearest_unigene=Hs.587502 | ||
| + | |num_trans=7 | ||
| + | |species=human | ||
| + | |start=35658010 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000602361.1 ENST00000363046.1 NR_003051 uc003zxh.2 uc064sxr.1 M29212 AF458223 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_100601.1 | |tss_id=hg_100601.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 17:12, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000602361.1 ENST00000363046.1 NR_003051 uc003zxh.2 uc064sxr.1 M29212 AF458223 |
|---|---|
| Distance: | 0 |
| Num_trans: | 7 |
| All_trans: | ENST00000602361.1:0 ENST00000363046.1:0 NR_003051:0 uc003zxh.2:0 uc064sxr.1:0 M29212:0 AF458223:0 |
TATA-Box annotation
| Distance to TSS: | 1 |
|---|---|
| Nearest PromoterID: | NR_003051 |
| Entrez ID: | 6023 |
| Nearest Unigene: | Hs.587502 |
| Nearest Refseq: | NR_003051 |
| Nearest Ensembl: | ENSG00000269900 |
| Gene Name: | RNA component of mitochondrial RNA processing endoribonuclease |
| Gene Alias: | CHH |
| Gene Description: | RNA component of mitochondrial RNA processing endoribonuclease |
| Gene Type: | ncRNA |
| CpG%: | 0.035 |
| GC%: | 0.492537 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
