Difference between revisions of "TSS:Hg 10066.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.085 |distance_to_tss=120 |entrez_id=55735 |gc_percent=0.661692 |gene_alias=dJ126A5.1 |gene_description=DnaJ heat shock protein family (Hsp40) member...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=AL833841:1 BC008772:-7 HQ447595:-9 KJ899180:-9 KJ902869:-9 CU675235:-9 CU680804:-9 ENST00000426784.1:-11 uc057bwj.1:-11 BC006086:-11 AK294539:-12 ENST00000485073.5:-13 uc057bwm.1:-13 AF306694:-13 AK001599:-22 BC014145:-23 AY336749:-25 ENST00000465911.1:-28 uc057bwo.1:-28 AF306695:-28 ENST00000473993.5:-31 uc057bwk.1:-31 ENST00000460594.5:-32 uc057bwn.1:-32 NM_018198:-115 ENST00000377577.9:-133 ENST00000294401.11:-133 uc001aof.3:-133 uc001aog.3:-133 | ||
| + | |chr=chr1 | ||
|cpg_percent=0.085 | |cpg_percent=0.085 | ||
| + | |distance=1 | ||
|distance_to_tss=120 | |distance_to_tss=120 | ||
| + | |end=6701791 | ||
|entrez_id=55735 | |entrez_id=55735 | ||
|gc_percent=0.661692 | |gc_percent=0.661692 | ||
|gene_alias=dJ126A5.1 | |gene_alias=dJ126A5.1 | ||
|gene_description=DnaJ heat shock protein family (Hsp40) member C11 | |gene_description=DnaJ heat shock protein family (Hsp40) member C11 | ||
| − | |gene_name=DNAJC11 | + | |gene_id=55735 |
| + | |gene_name=DnaJ heat shock protein family (Hsp40) member C11 | ||
| + | |gene_source=HGNC:25570 | ||
| + | |gene_symbol=DNAJC11 | ||
| + | |gene_synonyms=FLJ10737 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:25570 | ||
|nearest_ensembl=ENSG00000007923 | |nearest_ensembl=ENSG00000007923 | ||
|nearest_promoter_id=NM_018198 | |nearest_promoter_id=NM_018198 | ||
|nearest_refseq=NM_018198 | |nearest_refseq=NM_018198 | ||
|nearest_unigene=Hs.462640 | |nearest_unigene=Hs.462640 | ||
| + | |num_trans=29 | ||
| + | |species=human | ||
| + | |start=6701780 | ||
| + | |strand=- | ||
| + | |transcript_name=AL833841 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_10066.1 | |tss_id=hg_10066.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 17:14, 8 March 2018
Basic information about the TSS
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|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AL833841 |
|---|---|
| Distance: | 1 |
| Num_trans: | 29 |
| All_trans: | AL833841:1 BC008772:-7 HQ447595:-9 KJ899180:-9 KJ902869:-9 CU675235:-9 CU680804:-9 ENST00000426784.1:-11 uc057bwj.1:-11 BC006086:-11 AK294539:-12 ENST00000485073.5:-13 uc057bwm.1:-13 AF306694:-13 AK001599:-22 BC014145:-23 AY336749:-25 ENST00000465911.1:-28 uc057bwo.1:-28 AF306695:-28 ENST00000473993.5:-31 uc057bwk.1:-31 ENST00000460594.5:-32 uc057bwn.1:-32 NM_018198:-115 ENST00000377577.9:-133 ENST00000294401.11:-133 uc001aof.3:-133 uc001aog.3:-133 |
TATA-Box annotation
| Distance to TSS: | 120 |
|---|---|
| Nearest PromoterID: | NM_018198 |
| Entrez ID: | 55735 |
| Nearest Unigene: | Hs.462640 |
| Nearest Refseq: | NM_018198 |
| Nearest Ensembl: | ENSG00000007923 |
| Gene Name: | DnaJ heat shock protein family (Hsp40) member C11 |
| Gene Alias: | dJ126A5.1 |
| Gene Description: | DnaJ heat shock protein family (Hsp40) member C11 |
| Gene Type: | protein-coding |
| CpG%: | 0.085 |
| GC%: | 0.661692 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
