Difference between revisions of "TSS:Hg 100666.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.135 |distance_to_tss=47 |entrez_id=84681 |gc_percent=0.78607 |gene_alias=HIT-17 |gene_description=histidine triad nucleotide binding protein 2 |gene...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=ENST00000472085.5:0 uc064szq.1:0 AK222582:0 AF356515:-1 AY033094:-8 ENST00000259667.5:-13 ENST00000461169.1:-13 uc003zyh.4:-13 uc064szu.1:-13 AF356875:-13 BC047737:-13 AF085236:-18 NM_032593:-37 ENST00000474908.5:-344 uc064szr.1:-344 BC033538:-344 ENST00000474848.6:-346 uc064szs.1:-346 AK309795:-476 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.135 | |cpg_percent=0.135 | ||
| + | |distance=0 | ||
|distance_to_tss=47 | |distance_to_tss=47 | ||
| + | |end=35815008 | ||
|entrez_id=84681 | |entrez_id=84681 | ||
|gc_percent=0.78607 | |gc_percent=0.78607 | ||
|gene_alias=HIT-17 | |gene_alias=HIT-17 | ||
|gene_description=histidine triad nucleotide binding protein 2 | |gene_description=histidine triad nucleotide binding protein 2 | ||
| − | |gene_name=HINT2 | + | |gene_id=84681 |
| + | |gene_name=histidine triad nucleotide binding protein 2 | ||
| + | |gene_source=HGNC:18344 | ||
| + | |gene_symbol=HINT2 | ||
| + | |gene_synonyms= | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:18344 | ||
|nearest_ensembl=ENSG00000137133 | |nearest_ensembl=ENSG00000137133 | ||
|nearest_promoter_id=NM_032593 | |nearest_promoter_id=NM_032593 | ||
|nearest_refseq=NM_032593 | |nearest_refseq=NM_032593 | ||
|nearest_unigene=Hs.70573 | |nearest_unigene=Hs.70573 | ||
| + | |num_trans=19 | ||
| + | |species=human | ||
| + | |start=35814988 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000472085.5 uc064szq.1 AK222582 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_100666.1 | |tss_id=hg_100666.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=Q53HJ8 | ||
}} | }} | ||
Revision as of 17:14, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000472085.5 uc064szq.1 AK222582 |
|---|---|
| Distance: | 0 |
| Num_trans: | 19 |
| All_trans: | ENST00000472085.5:0 uc064szq.1:0 AK222582:0 AF356515:-1 AY033094:-8 ENST00000259667.5:-13 ENST00000461169.1:-13 uc003zyh.4:-13 uc064szu.1:-13 AF356875:-13 BC047737:-13 AF085236:-18 NM_032593:-37 ENST00000474908.5:-344 uc064szr.1:-344 BC033538:-344 ENST00000474848.6:-346 uc064szs.1:-346 AK309795:-476 |
TATA-Box annotation
| Distance to TSS: | 47 |
|---|---|
| Nearest PromoterID: | NM_032593 |
| Entrez ID: | 84681 |
| Nearest Unigene: | Hs.70573 |
| Nearest Refseq: | NM_032593 |
| Nearest Ensembl: | ENSG00000137133 |
| Gene Name: | histidine triad nucleotide binding protein 2 |
| Gene Alias: | HIT-17 |
| Gene Description: | histidine triad nucleotide binding protein 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.135 |
| GC%: | 0.78607 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
