Difference between revisions of "TSS:Hg 10069.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.12 |distance_to_tss=-921 |entrez_id=23261 |gc_percent=0.721393 |gene_alias=CANPMR |gene_description=calmodulin binding transcription activator 1 |ge...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=ENST00000442889.1:-437 uc057bwq.1:-437 | ||
| + | |chr=chr1 | ||
|cpg_percent=0.12 | |cpg_percent=0.12 | ||
| + | |distance=-437 | ||
|distance_to_tss=-921 | |distance_to_tss=-921 | ||
| + | |end=6784406 | ||
|entrez_id=23261 | |entrez_id=23261 | ||
|gc_percent=0.721393 | |gc_percent=0.721393 | ||
| Line 12: | Line 16: | ||
|nearest_refseq=NM_015215 | |nearest_refseq=NM_015215 | ||
|nearest_unigene=Hs.397705 | |nearest_unigene=Hs.397705 | ||
| + | |num_trans=2 | ||
| + | |species=human | ||
| + | |start=6784400 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000442889.1 uc057bwq.1 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_10069.1 | |tss_id=hg_10069.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Revision as of 17:14, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000442889.1 uc057bwq.1 |
|---|---|
| Distance: | -437 |
| Num_trans: | 2 |
| All_trans: | ENST00000442889.1:-437 uc057bwq.1:-437 |
TATA-Box annotation
| Distance to TSS: | -921 |
|---|---|
| Nearest PromoterID: | NM_015215 |
| Entrez ID: | 23261 |
| Nearest Unigene: | Hs.397705 |
| Nearest Refseq: | NM_015215 |
| Nearest Ensembl: | ENSG00000171735 |
| Gene Name: | CAMTA1 |
| Gene Alias: | CANPMR |
| Gene Description: | calmodulin binding transcription activator 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.12 |
| GC%: | 0.721393 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
