Difference between revisions of "TSS:Hg 10073.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.02 |distance_to_tss=-381361 |entrez_id=9341 |gc_percent=0.572139 |gene_alias=CEB |gene_description=vesicle associated membrane protein 3 |gene_name=...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=ENST00000618051.1:134 uc057bxe.1:134 AK128074:360 ENST00000411708.1:469 uc057bxf.1:469 | ||
| + | |chr=chr1 | ||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
| + | |distance=134 | ||
|distance_to_tss=-381361 | |distance_to_tss=-381361 | ||
| + | |end=7389928 | ||
|entrez_id=9341 | |entrez_id=9341 | ||
|gc_percent=0.572139 | |gc_percent=0.572139 | ||
| Line 12: | Line 16: | ||
|nearest_refseq=NM_004781 | |nearest_refseq=NM_004781 | ||
|nearest_unigene=Hs.66708 | |nearest_unigene=Hs.66708 | ||
| + | |num_trans=5 | ||
| + | |species=human | ||
| + | |start=7389887 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000618051.1 uc057bxe.1 | ||
| + | |tss_classification=no | ||
|tss_id=hg_10073.1 | |tss_id=hg_10073.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Revision as of 18:12, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000618051.1 uc057bxe.1 |
|---|---|
| Distance: | 134 |
| Num_trans: | 5 |
| All_trans: | ENST00000618051.1:134 uc057bxe.1:134 AK128074:360 ENST00000411708.1:469 uc057bxf.1:469 |
TATA-Box annotation
| Distance to TSS: | -381361 |
|---|---|
| Nearest PromoterID: | NM_004781 |
| Entrez ID: | 9341 |
| Nearest Unigene: | Hs.66708 |
| Nearest Refseq: | NM_004781 |
| Nearest Ensembl: | ENSG00000049245 |
| Gene Name: | VAMP3 |
| Gene Alias: | CEB |
| Gene Description: | vesicle associated membrane protein 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.572139 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
