Difference between revisions of "TSS:Hg 100740.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.12 |distance_to_tss=-126 |entrez_id=26267 |gc_percent=0.736318 |gene_alias=FBX10|PRMT11 |gene_description=F-box protein 10 |gene_name=FBXO10 |gene_t...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |PRMT11= | ||
| + | |all_trans=ENST00000541607.1:18 uc064tcw.1:18 ENST00000276960.7:44 uc064tcs.1:44 ENST00000432825.6:114 NM_012166:114 uc004aab.3:114 AF176705:115 AF174598:115 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.12 | |cpg_percent=0.12 | ||
| + | |distance=18 | ||
|distance_to_tss=-126 | |distance_to_tss=-126 | ||
| + | |end=37576392 | ||
|entrez_id=26267 | |entrez_id=26267 | ||
|gc_percent=0.736318 | |gc_percent=0.736318 | ||
|gene_alias=FBX10|PRMT11 | |gene_alias=FBX10|PRMT11 | ||
|gene_description=F-box protein 10 | |gene_description=F-box protein 10 | ||
| − | |gene_name=FBXO10 | + | |gene_id=26267 |
| + | |gene_name=F-box protein 10 | ||
| + | |gene_source=HGNC:13589 | ||
| + | |gene_symbol=FBXO10 | ||
| + | |gene_synonyms=FBX10 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:13589 | ||
|nearest_ensembl=ENSG00000147912 | |nearest_ensembl=ENSG00000147912 | ||
|nearest_promoter_id=NM_012166 | |nearest_promoter_id=NM_012166 | ||
|nearest_refseq=NM_012166 | |nearest_refseq=NM_012166 | ||
|nearest_unigene=Hs.709527 | |nearest_unigene=Hs.709527 | ||
| + | |num_trans=9 | ||
| + | |species=human | ||
| + | |start=37576366 | ||
| + | |strand=- | ||
|tata_box="-78(GCTTTTATGCGC,+,0.00)" | |tata_box="-78(GCTTTTATGCGC,+,0.00)" | ||
| + | |transcript_name=ENST00000541607.1 uc064tcw.1 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_100740.1 | |tss_id=hg_100740.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=F5GXN9 | ||
}} | }} | ||
Revision as of 18:13, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000541607.1 uc064tcw.1 |
|---|---|
| Distance: | 18 |
| Num_trans: | 9 |
| All_trans: | ENST00000541607.1:18 uc064tcw.1:18 ENST00000276960.7:44 uc064tcs.1:44 ENST00000432825.6:114 NM_012166:114 uc004aab.3:114 AF176705:115 AF174598:115 |
TATA-Box annotation
| Distance to TSS: | -126 |
|---|---|
| Nearest PromoterID: | NM_012166 |
| Entrez ID: | 26267 |
| Nearest Unigene: | Hs.709527 |
| Nearest Refseq: | NM_012166 |
| Nearest Ensembl: | ENSG00000147912 |
| Gene Name: | F-box protein 10 |
| Gene Alias: | FBX10 |
| Gene Description: | F-box protein 10 |
| Gene Type: | protein-coding |
| CpG%: | 0.12 |
| GC%: | 0.736318 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-78(GCTTTTATGCGC,+,0.00)" |
