Difference between revisions of "TSS:Hg 100776.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.125 |distance_to_tss=82 |entrez_id=347252 |gc_percent=0.751244 |gene_alias=IGFBP-RP4|IGFBPRP4|bA113O24.1 |gene_description=insulin like growth facto...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |IGFBPRP4= | ||
| + | |all_trans=BC146371:-51 AB463783:-52 ENST00000377694.1:-72 NM_001007563:-72 uc004aaz.4:-72 AK131521:355 | ||
| + | |bA113O24.1= | ||
| + | |chr=chr9 | ||
|cpg_percent=0.125 | |cpg_percent=0.125 | ||
| + | |distance=-51 | ||
|distance_to_tss=82 | |distance_to_tss=82 | ||
| + | |end=38424375 | ||
|entrez_id=347252 | |entrez_id=347252 | ||
|gc_percent=0.751244 | |gc_percent=0.751244 | ||
|gene_alias=IGFBP-RP4|IGFBPRP4|bA113O24.1 | |gene_alias=IGFBP-RP4|IGFBPRP4|bA113O24.1 | ||
|gene_description=insulin like growth factor binding protein like 1 | |gene_description=insulin like growth factor binding protein like 1 | ||
| − | |gene_name=IGFBPL1 | + | |gene_id=347252 |
| + | |gene_name=insulin like growth factor binding protein-like 1 | ||
| + | |gene_source=HGNC:20081 | ||
| + | |gene_symbol=IGFBPL1 | ||
| + | |gene_synonyms=bA113O24.1 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:20081 | ||
|nearest_ensembl=ENSG00000137142 | |nearest_ensembl=ENSG00000137142 | ||
|nearest_promoter_id=NM_001007563 | |nearest_promoter_id=NM_001007563 | ||
|nearest_refseq=NM_001007563 | |nearest_refseq=NM_001007563 | ||
|nearest_unigene=Hs.349705 | |nearest_unigene=Hs.349705 | ||
| + | |num_trans=6 | ||
| + | |species=human | ||
| + | |start=38424354 | ||
| + | |strand=- | ||
| + | |transcript_name=BC146371 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_100776.1 | |tss_id=hg_100776.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 18:14, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | BC146371 |
|---|---|
| Distance: | -51 |
| Num_trans: | 6 |
| All_trans: | BC146371:-51 AB463783:-52 ENST00000377694.1:-72 NM_001007563:-72 uc004aaz.4:-72 AK131521:355 |
TATA-Box annotation
| Distance to TSS: | 82 |
|---|---|
| Nearest PromoterID: | NM_001007563 |
| Entrez ID: | 347252 |
| Nearest Unigene: | Hs.349705 |
| Nearest Refseq: | NM_001007563 |
| Nearest Ensembl: | ENSG00000137142 |
| Gene Name: | insulin like growth factor binding protein-like 1 |
| Gene Alias: | IGFBP-RP4 |
| Gene Description: | insulin like growth factor binding protein like 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.125 |
| GC%: | 0.751244 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
