Difference between revisions of "TSS:Hg 100830.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.055 |distance_to_tss=61 |entrez_id=494558 |gc_percent=0.577114 |gene_alias=- |gene_description=C9orf135 antisense RNA 1 (head to head) |gene_name=C9...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=ENST00000453410.1:0 ENST00000526458.1:0 uc004ahk.5:0 uc064tpu.1:0 BC039385:0 ENST00000439418.1:-44 NR_038833:-44 uc022bhy.2:-44 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.055 | |cpg_percent=0.055 | ||
| + | |distance=0 | ||
|distance_to_tss=61 | |distance_to_tss=61 | ||
| + | |end=69820695 | ||
|entrez_id=494558 | |entrez_id=494558 | ||
|gc_percent=0.577114 | |gc_percent=0.577114 | ||
|gene_alias=- | |gene_alias=- | ||
|gene_description=C9orf135 antisense RNA 1 (head to head) | |gene_description=C9orf135 antisense RNA 1 (head to head) | ||
| − | |gene_name=C9orf135-AS1 | + | |gene_id=494558 |
| + | |gene_name=C9orf135 antisense RNA 1 (head to head) | ||
| + | |gene_source=HGNC:48713 | ||
| + | |gene_symbol=C9orf135-AS1 | ||
| + | |gene_synonyms= | ||
|gene_type=ncRNA | |gene_type=ncRNA | ||
| + | |hgnc_mgi_id=HGNC:48713 | ||
|nearest_ensembl= | |nearest_ensembl= | ||
|nearest_promoter_id=NR_038833 | |nearest_promoter_id=NR_038833 | ||
|nearest_refseq=NR_038833 | |nearest_refseq=NR_038833 | ||
|nearest_unigene=Hs.130722 | |nearest_unigene=Hs.130722 | ||
| + | |num_trans=8 | ||
| + | |species=human | ||
| + | |start=69820660 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000453410.1 ENST00000526458.1 uc004ahk.5 uc064tpu.1 BC039385 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_100830.1 | |tss_id=hg_100830.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 18:17, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000453410.1 ENST00000526458.1 uc004ahk.5 uc064tpu.1 BC039385 |
|---|---|
| Distance: | 0 |
| Num_trans: | 8 |
| All_trans: | ENST00000453410.1:0 ENST00000526458.1:0 uc004ahk.5:0 uc064tpu.1:0 BC039385:0 ENST00000439418.1:-44 NR_038833:-44 uc022bhy.2:-44 |
TATA-Box annotation
| Distance to TSS: | 61 |
|---|---|
| Nearest PromoterID: | NR_038833 |
| Entrez ID: | 494558 |
| Nearest Unigene: | Hs.130722 |
| Nearest Refseq: | NR_038833 |
| Nearest Ensembl: | |
| Gene Name: | C9orf135 antisense RNA 1 (head to head) |
| Gene Alias: | - |
| Gene Description: | C9orf135 antisense RNA 1 (head to head) |
| Gene Type: | ncRNA |
| CpG%: | 0.055 |
| GC%: | 0.577114 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
