Difference between revisions of "TSS:Hg 100907.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.135 |distance_to_tss=321927 |entrez_id=23670 |gc_percent=0.746269 |gene_alias=- |gene_description=transmembrane protein 2 |gene_name=TMEM2 |gene_typ...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=ENST00000354500.6:34 uc004aii.4:34 AL136545:34 ENST00000357533.6:103 uc064trd.1:103 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.135 | |cpg_percent=0.135 | ||
| + | |distance=34 | ||
|distance_to_tss=321927 | |distance_to_tss=321927 | ||
| + | |end=71446977 | ||
|entrez_id=23670 | |entrez_id=23670 | ||
|gc_percent=0.746269 | |gc_percent=0.746269 | ||
|gene_alias=- | |gene_alias=- | ||
|gene_description=transmembrane protein 2 | |gene_description=transmembrane protein 2 | ||
| − | |gene_name= | + | |gene_id=80036 |
| + | |gene_name=transient receptor potential cation channel subfamily M member 3 | ||
| + | |gene_source=HGNC:17992 | ||
| + | |gene_symbol=TRPM3 | ||
| + | |gene_synonyms=GON-2 KIAA1616 LTRPC3 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:17992 | ||
|nearest_ensembl=ENSG00000135048 | |nearest_ensembl=ENSG00000135048 | ||
|nearest_promoter_id=NM_001135820 | |nearest_promoter_id=NM_001135820 | ||
|nearest_refseq=NM_013390 | |nearest_refseq=NM_013390 | ||
|nearest_unigene=Hs.494146 | |nearest_unigene=Hs.494146 | ||
| + | |num_trans=5 | ||
| + | |species=human | ||
| + | |start=71446937 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000354500.6 uc004aii.4 AL136545 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_100907.1 | |tss_id=hg_100907.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 18:20, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000354500.6 uc004aii.4 AL136545 |
|---|---|
| Distance: | 34 |
| Num_trans: | 5 |
| All_trans: | ENST00000354500.6:34 uc004aii.4:34 AL136545:34 ENST00000357533.6:103 uc064trd.1:103 |
TATA-Box annotation
| Distance to TSS: | 321927 |
|---|---|
| Nearest PromoterID: | NM_001135820 |
| Entrez ID: | 23670 |
| Nearest Unigene: | Hs.494146 |
| Nearest Refseq: | NM_013390 |
| Nearest Ensembl: | ENSG00000135048 |
| Gene Name: | transient receptor potential cation channel subfamily M member 3 |
| Gene Alias: | - |
| Gene Description: | transmembrane protein 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.135 |
| GC%: | 0.746269 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
