Difference between revisions of "TSS:Hg 100941.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.02 |distance_to_tss=8 |entrez_id=138240 |gc_percent=0.353234 |gene_alias=- |gene_description=chromosome 9 open reading frame 57 |gene_name=C9orf57 |...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=ENST00000377024.7:-2 NM_001128618:-2 uc004aip.4:-2 BC036255:-2 BC044620:9 BC053956:9 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
| + | |distance=-2 | ||
|distance_to_tss=8 | |distance_to_tss=8 | ||
| + | |end=72060603 | ||
|entrez_id=138240 | |entrez_id=138240 | ||
|gc_percent=0.353234 | |gc_percent=0.353234 | ||
|gene_alias=- | |gene_alias=- | ||
|gene_description=chromosome 9 open reading frame 57 | |gene_description=chromosome 9 open reading frame 57 | ||
| − | |gene_name=C9orf57 | + | |gene_id=138240 |
| + | |gene_name=chromosome 9 open reading frame 57 | ||
| + | |gene_source=HGNC:27037 | ||
| + | |gene_symbol=C9orf57 | ||
| + | |gene_synonyms= | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:27037 | ||
|nearest_ensembl=ENSG00000204669 | |nearest_ensembl=ENSG00000204669 | ||
|nearest_promoter_id=NM_001128618 | |nearest_promoter_id=NM_001128618 | ||
|nearest_refseq=NM_001128618 | |nearest_refseq=NM_001128618 | ||
|nearest_unigene=Hs.371235 | |nearest_unigene=Hs.371235 | ||
| + | |num_trans=6 | ||
| + | |species=human | ||
| + | |start=72060591 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000377024.7 NM_001128618 uc004aip.4 BC036255 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_100941.1 | |tss_id=hg_100941.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=Q5W0N0 | ||
}} | }} | ||
Revision as of 18:22, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000377024.7 NM_001128618 uc004aip.4 BC036255 |
|---|---|
| Distance: | -2 |
| Num_trans: | 6 |
| All_trans: | ENST00000377024.7:-2 NM_001128618:-2 uc004aip.4:-2 BC036255:-2 BC044620:9 BC053956:9 |
TATA-Box annotation
| Distance to TSS: | 8 |
|---|---|
| Nearest PromoterID: | NM_001128618 |
| Entrez ID: | 138240 |
| Nearest Unigene: | Hs.371235 |
| Nearest Refseq: | NM_001128618 |
| Nearest Ensembl: | ENSG00000204669 |
| Gene Name: | chromosome 9 open reading frame 57 |
| Gene Alias: | - |
| Gene Description: | chromosome 9 open reading frame 57 |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.353234 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
