Difference between revisions of "TSS:Hg 100947.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.125 |distance_to_tss=268 |entrez_id=7763 |gc_percent=0.771144 |gene_alias=ZA20D2|ZFAND5A|ZNF216 |gene_description=zinc finger AN1-type containing 5...") |
|||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |ZFAND5A= | ||
| + | |ZNF216= | ||
| + | |all_trans=ENST00000488164.5:-5 uc064tsn.1:-5 ENST00000237937.7:-251 NM_001278245:-251 NM_001278244:-251 NM_001278243:-251 uc031ted.1:-251 ENST00000343431.6:-285 uc031tec.2:-285 ENST00000376956.3:-323 uc064tsp.1:-323 AK025782:-369 BC073131:-407 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.125 | |cpg_percent=0.125 | ||
| + | |distance=-5 | ||
|distance_to_tss=268 | |distance_to_tss=268 | ||
| + | |end=72364341 | ||
|entrez_id=7763 | |entrez_id=7763 | ||
|gc_percent=0.771144 | |gc_percent=0.771144 | ||
|gene_alias=ZA20D2|ZFAND5A|ZNF216 | |gene_alias=ZA20D2|ZFAND5A|ZNF216 | ||
|gene_description=zinc finger AN1-type containing 5 | |gene_description=zinc finger AN1-type containing 5 | ||
| − | |gene_name=ZFAND5 | + | |gene_id=7763 |
| + | |gene_name=zinc finger AN1-type containing 5 | ||
| + | |gene_source=HGNC:13008 | ||
| + | |gene_symbol=ZFAND5 | ||
| + | |gene_synonyms=ZFAND5A | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:13008 | ||
|nearest_ensembl=ENSG00000107372 | |nearest_ensembl=ENSG00000107372 | ||
|nearest_promoter_id=NM_001278243 | |nearest_promoter_id=NM_001278243 | ||
|nearest_refseq=NM_006007 | |nearest_refseq=NM_006007 | ||
|nearest_unigene=Hs.406096 | |nearest_unigene=Hs.406096 | ||
| + | |num_trans=13 | ||
| + | |species=human | ||
| + | |start=72364307 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000488164.5 uc064tsn.1 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_100947.1 | |tss_id=hg_100947.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 18:22, 8 March 2018
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000488164.5 uc064tsn.1 |
|---|---|
| Distance: | -5 |
| Num_trans: | 13 |
| All_trans: | ENST00000488164.5:-5 uc064tsn.1:-5 ENST00000237937.7:-251 NM_001278245:-251 NM_001278244:-251 NM_001278243:-251 uc031ted.1:-251 ENST00000343431.6:-285 uc031tec.2:-285 ENST00000376956.3:-323 uc064tsp.1:-323 AK025782:-369 BC073131:-407 |
TATA-Box annotation
| Distance to TSS: | 268 |
|---|---|
| Nearest PromoterID: | NM_001278243 |
| Entrez ID: | 7763 |
| Nearest Unigene: | Hs.406096 |
| Nearest Refseq: | NM_006007 |
| Nearest Ensembl: | ENSG00000107372 |
| Gene Name: | zinc finger AN1-type containing 5 |
| Gene Alias: | ZA20D2 |
| Gene Description: | zinc finger AN1-type containing 5 |
| Gene Type: | protein-coding |
| CpG%: | 0.125 |
| GC%: | 0.771144 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
