Difference between revisions of "TSS:Hg 101127.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.155 |distance_to_tss=306 |entrez_id=158158 |gc_percent=0.791045 |gene_alias=RAB45 |gene_description=RAS and EF-hand domain containing |gene_name=RAS...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=KJ895699:-38 AK290986:-41 ENST00000376447.3:-299 NM_152573:-299 uc004amo.2:-299 BC023566:-299 ENST00000340717.4:-348 uc004amp.2:-348 AK056176:-348 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.155 | |cpg_percent=0.155 | ||
| + | |distance=-38 | ||
|distance_to_tss=306 | |distance_to_tss=306 | ||
| + | |end=83062829 | ||
|entrez_id=158158 | |entrez_id=158158 | ||
|gc_percent=0.791045 | |gc_percent=0.791045 | ||
| Line 12: | Line 16: | ||
|nearest_refseq=NM_152573 | |nearest_refseq=NM_152573 | ||
|nearest_unigene=Hs.129136 | |nearest_unigene=Hs.129136 | ||
| + | |num_trans=9 | ||
| + | |species=human | ||
| + | |start=83062814 | ||
| + | |strand=- | ||
| + | |transcript_name=KJ895699 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_101127.1 | |tss_id=hg_101127.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Revision as of 18:30, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | KJ895699 |
|---|---|
| Distance: | -38 |
| Num_trans: | 9 |
| All_trans: | KJ895699:-38 AK290986:-41 ENST00000376447.3:-299 NM_152573:-299 uc004amo.2:-299 BC023566:-299 ENST00000340717.4:-348 uc004amp.2:-348 AK056176:-348 |
TATA-Box annotation
| Distance to TSS: | 306 |
|---|---|
| Nearest PromoterID: | NM_152573 |
| Entrez ID: | 158158 |
| Nearest Unigene: | Hs.129136 |
| Nearest Refseq: | NM_152573 |
| Nearest Ensembl: | ENSG00000165105 |
| Gene Name: | RASEF |
| Gene Alias: | RAB45 |
| Gene Description: | RAS and EF-hand domain containing |
| Gene Type: | protein-coding |
| CpG%: | 0.155 |
| GC%: | 0.791045 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
