Difference between revisions of "TSS:Hg 101128.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.14 |distance_to_tss=237 |entrez_id=158158 |gc_percent=0.776119 |gene_alias=RAB45 |gene_description=RAS and EF-hand domain containing |gene_name=RASE...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=AK290986:12 KJ895699:15 ENST00000376447.3:-227 NM_152573:-227 uc004amo.2:-227 BC023566:-227 ENST00000340717.4:-276 uc004amp.2:-276 AK056176:-276 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.14 | |cpg_percent=0.14 | ||
| + | |distance=12 | ||
|distance_to_tss=237 | |distance_to_tss=237 | ||
| + | |end=83062901 | ||
|entrez_id=158158 | |entrez_id=158158 | ||
|gc_percent=0.776119 | |gc_percent=0.776119 | ||
|gene_alias=RAB45 | |gene_alias=RAB45 | ||
|gene_description=RAS and EF-hand domain containing | |gene_description=RAS and EF-hand domain containing | ||
| − | |gene_name=RASEF | + | |gene_id=158158 |
| + | |gene_name=RAS and EF-hand domain containing | ||
| + | |gene_source=HGNC:26464 | ||
| + | |gene_symbol=RASEF | ||
| + | |gene_synonyms=FLJ31614 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:26464 | ||
|nearest_ensembl=ENSG00000165105 | |nearest_ensembl=ENSG00000165105 | ||
|nearest_promoter_id=NM_152573 | |nearest_promoter_id=NM_152573 | ||
|nearest_refseq=NM_152573 | |nearest_refseq=NM_152573 | ||
|nearest_unigene=Hs.129136 | |nearest_unigene=Hs.129136 | ||
| + | |num_trans=9 | ||
| + | |species=human | ||
| + | |start=83062881 | ||
| + | |strand=- | ||
| + | |transcript_name=AK290986 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_101128.1 | |tss_id=hg_101128.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=A8K4M1 | ||
}} | }} | ||
Revision as of 18:30, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AK290986 |
|---|---|
| Distance: | 12 |
| Num_trans: | 9 |
| All_trans: | AK290986:12 KJ895699:15 ENST00000376447.3:-227 NM_152573:-227 uc004amo.2:-227 BC023566:-227 ENST00000340717.4:-276 uc004amp.2:-276 AK056176:-276 |
TATA-Box annotation
| Distance to TSS: | 237 |
|---|---|
| Nearest PromoterID: | NM_152573 |
| Entrez ID: | 158158 |
| Nearest Unigene: | Hs.129136 |
| Nearest Refseq: | NM_152573 |
| Nearest Ensembl: | ENSG00000165105 |
| Gene Name: | RAS and EF-hand domain containing |
| Gene Alias: | RAB45 |
| Gene Description: | RAS and EF-hand domain containing |
| Gene Type: | protein-coding |
| CpG%: | 0.14 |
| GC%: | 0.776119 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
