Difference between revisions of "TSS:Hg 101131.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.115 |distance_to_tss=-14 |entrez_id=158158 |gc_percent=0.741294 |gene_alias=RAB45 |gene_description=RAS and EF-hand domain containing |gene_name=RAS...") |
|||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=ENST00000376447.3:8 NM_152573:8 uc004amo.2:8 BC023566:8 ENST00000340717.4:-28 uc004amp.2:-28 AK056176:-28 AK290986:266 KJ895699:269 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.115 | |cpg_percent=0.115 | ||
| + | |distance=8 | ||
|distance_to_tss=-14 | |distance_to_tss=-14 | ||
| + | |end=83063149 | ||
|entrez_id=158158 | |entrez_id=158158 | ||
|gc_percent=0.741294 | |gc_percent=0.741294 | ||
|gene_alias=RAB45 | |gene_alias=RAB45 | ||
|gene_description=RAS and EF-hand domain containing | |gene_description=RAS and EF-hand domain containing | ||
| − | |gene_name=RASEF | + | |gene_id=158158 |
| + | |gene_name=RAS and EF-hand domain containing | ||
| + | |gene_source=HGNC:26464 | ||
| + | |gene_symbol=RASEF | ||
| + | |gene_synonyms=FLJ31614 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:26464 | ||
|nearest_ensembl=ENSG00000165105 | |nearest_ensembl=ENSG00000165105 | ||
|nearest_promoter_id=NM_152573 | |nearest_promoter_id=NM_152573 | ||
|nearest_refseq=NM_152573 | |nearest_refseq=NM_152573 | ||
|nearest_unigene=Hs.129136 | |nearest_unigene=Hs.129136 | ||
| + | |num_trans=9 | ||
| + | |species=human | ||
| + | |start=83063135 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000376447.3 NM_152573 uc004amo.2 BC023566 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_101131.1 | |tss_id=hg_101131.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=Q8IZ41 | ||
}} | }} | ||
Revision as of 18:30, 8 March 2018
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000376447.3 NM_152573 uc004amo.2 BC023566 |
|---|---|
| Distance: | 8 |
| Num_trans: | 9 |
| All_trans: | ENST00000376447.3:8 NM_152573:8 uc004amo.2:8 BC023566:8 ENST00000340717.4:-28 uc004amp.2:-28 AK056176:-28 AK290986:266 KJ895699:269 |
TATA-Box annotation
| Distance to TSS: | -14 |
|---|---|
| Nearest PromoterID: | NM_152573 |
| Entrez ID: | 158158 |
| Nearest Unigene: | Hs.129136 |
| Nearest Refseq: | NM_152573 |
| Nearest Ensembl: | ENSG00000165105 |
| Gene Name: | RAS and EF-hand domain containing |
| Gene Alias: | RAB45 |
| Gene Description: | RAS and EF-hand domain containing |
| Gene Type: | protein-coding |
| CpG%: | 0.115 |
| GC%: | 0.741294 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
