Difference between revisions of "TSS:Hg 101149.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.13 |distance_to_tss=67 |entrez_id=105376114 |gc_percent=0.751244 |gene_alias=- |gene_description=uncharacterized LOC105376114 |gene_name=LOC10537611...") |
|||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=BC010066:-22 ENST00000257468.11:-23 uc004amw.4:-23 AK027576:-32 BC039294:-33 BC017289:-33 AK027556:-41 AL136643:-46 AB035275:106 AB528730:212 AF176069:215 AF293384:215 ENST00000376395.8:-292 uc004amv.4:-292 AK074535:-292 ENST00000529923.1:293 uc064tze.1:293 NM_013438:-342 NM_053067:-342 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.13 | |cpg_percent=0.13 | ||
| + | |distance=-22 | ||
|distance_to_tss=67 | |distance_to_tss=67 | ||
| + | |end=83707911 | ||
|entrez_id=105376114 | |entrez_id=105376114 | ||
|gc_percent=0.751244 | |gc_percent=0.751244 | ||
|gene_alias=- | |gene_alias=- | ||
|gene_description=uncharacterized LOC105376114 | |gene_description=uncharacterized LOC105376114 | ||
| − | |gene_name= | + | |gene_id=29979 |
| + | |gene_name=ubiquilin 1 | ||
| + | |gene_source=HGNC:12508 | ||
| + | |gene_symbol=UBQLN1 | ||
| + | |gene_synonyms=DA41 DSK2 PLIC-1 XDRP1 | ||
|gene_type=ncRNA | |gene_type=ncRNA | ||
| + | |hgnc_mgi_id=HGNC:12508 | ||
|nearest_ensembl=ENSG00000254473 | |nearest_ensembl=ENSG00000254473 | ||
|nearest_promoter_id=NR_135839 | |nearest_promoter_id=NR_135839 | ||
|nearest_refseq=NR_135839 | |nearest_refseq=NR_135839 | ||
|nearest_unigene=Hs.9589 | |nearest_unigene=Hs.9589 | ||
| + | |num_trans=19 | ||
| + | |species=human | ||
| + | |start=83707893 | ||
| + | |strand=- | ||
| + | |transcript_name=BC010066 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_101149.1 | |tss_id=hg_101149.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 18:31, 8 March 2018
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | BC010066 |
|---|---|
| Distance: | -22 |
| Num_trans: | 19 |
| All_trans: | BC010066:-22 ENST00000257468.11:-23 uc004amw.4:-23 AK027576:-32 BC039294:-33 BC017289:-33 AK027556:-41 AL136643:-46 AB035275:106 AB528730:212 AF176069:215 AF293384:215 ENST00000376395.8:-292 uc004amv.4:-292 AK074535:-292 ENST00000529923.1:293 uc064tze.1:293 NM_013438:-342 NM_053067:-342 |
TATA-Box annotation
| Distance to TSS: | 67 |
|---|---|
| Nearest PromoterID: | NR_135839 |
| Entrez ID: | 105376114 |
| Nearest Unigene: | Hs.9589 |
| Nearest Refseq: | NR_135839 |
| Nearest Ensembl: | ENSG00000254473 |
| Gene Name: | ubiquilin 1 |
| Gene Alias: | - |
| Gene Description: | uncharacterized LOC105376114 |
| Gene Type: | ncRNA |
| CpG%: | 0.13 |
| GC%: | 0.751244 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
