Difference between revisions of "TSS:Hg 101152.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.08 |distance_to_tss=153 |entrez_id=29979 |gc_percent=0.567164 |gene_alias=DA41|DSK2|PLIC-1|UBQN|XDRP1 |gene_description=ubiquilin 1 |gene_name=UBQLN...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |DSK2= | ||
| + | |PLIC-1= | ||
| + | |UBQN= | ||
| + | |XDRP1= | ||
| + | |all_trans=ENST00000376395.8:-97 uc004amv.4:-97 AK074535:-97 AL136643:137 AK027556:142 NM_013438:-147 NM_053067:-147 BC039294:150 BC017289:150 AK027576:151 ENST00000257468.11:160 uc004amw.4:160 BC010066:161 AB035275:306 AB528730:412 AF176069:415 AF293384:415 ENST00000529923.1:493 uc064tze.1:493 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.08 | |cpg_percent=0.08 | ||
| + | |distance=-97 | ||
|distance_to_tss=153 | |distance_to_tss=153 | ||
| + | |end=83708106 | ||
|entrez_id=29979 | |entrez_id=29979 | ||
|gc_percent=0.567164 | |gc_percent=0.567164 | ||
|gene_alias=DA41|DSK2|PLIC-1|UBQN|XDRP1 | |gene_alias=DA41|DSK2|PLIC-1|UBQN|XDRP1 | ||
|gene_description=ubiquilin 1 | |gene_description=ubiquilin 1 | ||
| − | |gene_name=UBQLN1 | + | |gene_id=29979 |
| + | |gene_name=ubiquilin 1 | ||
| + | |gene_source=HGNC:12508 | ||
| + | |gene_symbol=UBQLN1 | ||
| + | |gene_synonyms=DA41 DSK2 PLIC-1 XDRP1 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:12508 | ||
|nearest_ensembl=ENSG00000135018 | |nearest_ensembl=ENSG00000135018 | ||
|nearest_promoter_id=NM_013438 | |nearest_promoter_id=NM_013438 | ||
|nearest_refseq=NM_013438 | |nearest_refseq=NM_013438 | ||
|nearest_unigene=Hs.9589 | |nearest_unigene=Hs.9589 | ||
| + | |num_trans=19 | ||
| + | |species=human | ||
| + | |start=83708093 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000376395.8 uc004amv.4 AK074535 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_101152.1 | |tss_id=hg_101152.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=A0A024R284 Q9UMX0 | ||
}} | }} | ||
Revision as of 18:31, 8 March 2018
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000376395.8 uc004amv.4 AK074535 |
|---|---|
| Distance: | -97 |
| Num_trans: | 19 |
| All_trans: | ENST00000376395.8:-97 uc004amv.4:-97 AK074535:-97 AL136643:137 AK027556:142 NM_013438:-147 NM_053067:-147 BC039294:150 BC017289:150 AK027576:151 ENST00000257468.11:160 uc004amw.4:160 BC010066:161 AB035275:306 AB528730:412 AF176069:415 AF293384:415 ENST00000529923.1:493 uc064tze.1:493 |
TATA-Box annotation
| Distance to TSS: | 153 |
|---|---|
| Nearest PromoterID: | NM_013438 |
| Entrez ID: | 29979 |
| Nearest Unigene: | Hs.9589 |
| Nearest Refseq: | NM_013438 |
| Nearest Ensembl: | ENSG00000135018 |
| Gene Name: | ubiquilin 1 |
| Gene Alias: | DA41 |
| Gene Description: | ubiquilin 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.08 |
| GC%: | 0.567164 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
