Difference between revisions of "TSS:Hg 101162.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.08 |distance_to_tss=55 |entrez_id=84267 |gc_percent=0.646766 |gene_alias=- |gene_description=chromosome 9 open reading frame 64 |gene_name=C9orf64 |...") |
|||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=ENST00000376344.7:-25 uc004anb.4:-25 BC004407:-25 NM_032307:-50 BC137461:63 BC137462:63 ENST00000314700.5:-294 NM_001317997:-294 uc004anc.4:-294 AK090882:-294 ENST00000376340.2:355 uc064uaf.1:355 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.08 | |cpg_percent=0.08 | ||
| + | |distance=-25 | ||
|distance_to_tss=55 | |distance_to_tss=55 | ||
| + | |end=83956692 | ||
|entrez_id=84267 | |entrez_id=84267 | ||
|gc_percent=0.646766 | |gc_percent=0.646766 | ||
|gene_alias=- | |gene_alias=- | ||
|gene_description=chromosome 9 open reading frame 64 | |gene_description=chromosome 9 open reading frame 64 | ||
| − | |gene_name=C9orf64 | + | |gene_id=84267 |
| + | |gene_name=chromosome 9 open reading frame 64 | ||
| + | |gene_source=HGNC:28144 | ||
| + | |gene_symbol=C9orf64 | ||
| + | |gene_synonyms=MGC10999 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:28144 | ||
|nearest_ensembl=ENSG00000165118 | |nearest_ensembl=ENSG00000165118 | ||
|nearest_promoter_id=NM_032307 | |nearest_promoter_id=NM_032307 | ||
|nearest_refseq=NM_032307 | |nearest_refseq=NM_032307 | ||
|nearest_unigene=Hs.208914 | |nearest_unigene=Hs.208914 | ||
| + | |num_trans=12 | ||
| + | |species=human | ||
| + | |start=83956681 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000376344.7 uc004anb.4 BC004407 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_101162.1 | |tss_id=hg_101162.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=Q5T6V5 | ||
}} | }} | ||
Revision as of 18:31, 8 March 2018
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000376344.7 uc004anb.4 BC004407 |
|---|---|
| Distance: | -25 |
| Num_trans: | 12 |
| All_trans: | ENST00000376344.7:-25 uc004anb.4:-25 BC004407:-25 NM_032307:-50 BC137461:63 BC137462:63 ENST00000314700.5:-294 NM_001317997:-294 uc004anc.4:-294 AK090882:-294 ENST00000376340.2:355 uc064uaf.1:355 |
TATA-Box annotation
| Distance to TSS: | 55 |
|---|---|
| Nearest PromoterID: | NM_032307 |
| Entrez ID: | 84267 |
| Nearest Unigene: | Hs.208914 |
| Nearest Refseq: | NM_032307 |
| Nearest Ensembl: | ENSG00000165118 |
| Gene Name: | chromosome 9 open reading frame 64 |
| Gene Alias: | - |
| Gene Description: | chromosome 9 open reading frame 64 |
| Gene Type: | protein-coding |
| CpG%: | 0.08 |
| GC%: | 0.646766 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
