Difference between revisions of "TSS:Hg 101166.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.02 |distance_to_tss=4793 |entrez_id=3190 |gc_percent=0.437811 |gene_alias=AUKS|CSBP|HNRPK|TUNP |gene_description=heterogeneous nuclear ribonucleopro...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |CSBP= | ||
| + | |HNRPK= | ||
| + | |TUNP= | ||
| + | |all_trans=ENST00000376256.2:-274 uc064uan.1:-274 AK123117:-302 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
| + | |distance=-274 | ||
|distance_to_tss=4793 | |distance_to_tss=4793 | ||
| + | |end=83975496 | ||
|entrez_id=3190 | |entrez_id=3190 | ||
|gc_percent=0.437811 | |gc_percent=0.437811 | ||
|gene_alias=AUKS|CSBP|HNRPK|TUNP | |gene_alias=AUKS|CSBP|HNRPK|TUNP | ||
|gene_description=heterogeneous nuclear ribonucleoprotein K | |gene_description=heterogeneous nuclear ribonucleoprotein K | ||
| − | |gene_name=HNRNPK | + | |gene_id=3190 |
| + | |gene_name=heterogeneous nuclear ribonucleoprotein K | ||
| + | |gene_source=HGNC:5044 | ||
| + | |gene_symbol=HNRNPK | ||
| + | |gene_synonyms=CSBP TUNP | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:5044 | ||
|nearest_ensembl=ENSG00000165119 | |nearest_ensembl=ENSG00000165119 | ||
|nearest_promoter_id=NM_001318186 | |nearest_promoter_id=NM_001318186 | ||
|nearest_refseq=NM_002140 | |nearest_refseq=NM_002140 | ||
|nearest_unigene=Hs.522257 | |nearest_unigene=Hs.522257 | ||
| + | |num_trans=3 | ||
| + | |species=human | ||
| + | |start=83975459 | ||
| + | |strand=- | ||
|tata_box="81(CCTTTTATATAA,+,0.00)" | |tata_box="81(CCTTTTATATAA,+,0.00)" | ||
| + | |transcript_name=ENST00000376256.2 uc064uan.1 | ||
| + | |tss_classification=no | ||
|tss_id=hg_101166.1 | |tss_id=hg_101166.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 18:31, 8 March 2018
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000376256.2 uc064uan.1 |
|---|---|
| Distance: | -274 |
| Num_trans: | 3 |
| All_trans: | ENST00000376256.2:-274 uc064uan.1:-274 AK123117:-302 |
TATA-Box annotation
| Distance to TSS: | 4793 |
|---|---|
| Nearest PromoterID: | NM_001318186 |
| Entrez ID: | 3190 |
| Nearest Unigene: | Hs.522257 |
| Nearest Refseq: | NM_002140 |
| Nearest Ensembl: | ENSG00000165119 |
| Gene Name: | heterogeneous nuclear ribonucleoprotein K |
| Gene Alias: | AUKS |
| Gene Description: | heterogeneous nuclear ribonucleoprotein K |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.437811 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "81(CCTTTTATATAA,+,0.00)" |
