Difference between revisions of "TSS:Hg 101211.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.13 |distance_to_tss=28 |entrez_id=81689 |gc_percent=0.726368 |gene_alias=HBLD2|ISA1|hIscA |gene_description=iron-sulfur cluster assembly 1 |gene_nam...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |ISA1= | ||
| + | |all_trans=ENST00000375991.8:0 ENST00000326094.4:0 NM_030940:0 uc004aop.4:0 uc064ubv.1:0 AK309289:0 AK225937:0 AL834356:0 BC002675:0 AF284752:0 AK055643:0 AY015642:2 BC071621:3 BC053900:17 AB528754:54 AM393721:54 AK296093:-179 ENST00000311534.6:404 uc064ubu.1:404 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.13 | |cpg_percent=0.13 | ||
| + | |distance=0 | ||
|distance_to_tss=28 | |distance_to_tss=28 | ||
| + | |end=86282582 | ||
|entrez_id=81689 | |entrez_id=81689 | ||
|gc_percent=0.726368 | |gc_percent=0.726368 | ||
|gene_alias=HBLD2|ISA1|hIscA | |gene_alias=HBLD2|ISA1|hIscA | ||
|gene_description=iron-sulfur cluster assembly 1 | |gene_description=iron-sulfur cluster assembly 1 | ||
| − | |gene_name=ISCA1 | + | |gene_id=81689 |
| + | |gene_name=iron-sulfur cluster assembly 1 | ||
| + | |gene_source=HGNC:28660 | ||
| + | |gene_symbol=ISCA1 | ||
| + | |gene_synonyms=ISA1 MGC4276 hIscA | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hIscA= | ||
| + | |hgnc_mgi_id=HGNC:28660 | ||
|nearest_ensembl=ENSG00000135070 | |nearest_ensembl=ENSG00000135070 | ||
|nearest_promoter_id=NM_030940 | |nearest_promoter_id=NM_030940 | ||
|nearest_refseq=NM_030940 | |nearest_refseq=NM_030940 | ||
|nearest_unigene=Hs.449291 | |nearest_unigene=Hs.449291 | ||
| + | |num_trans=19 | ||
| + | |species=human | ||
| + | |start=86282511 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000375991.8 ENST00000326094.4 NM_030940 uc004aop.4 uc064ubv.1 AK309289 AK225937 AL834356 BC002675 AF284752 AK055643 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_101211.1 | |tss_id=hg_101211.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=Q5TBE9 Q9BUE6 | ||
}} | }} | ||
Revision as of 18:33, 8 March 2018
Basic information about the TSS
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|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000375991.8 ENST00000326094.4 NM_030940 uc004aop.4 uc064ubv.1 AK309289 AK225937 AL834356 BC002675 AF284752 AK055643 |
|---|---|
| Distance: | 0 |
| Num_trans: | 19 |
| All_trans: | ENST00000375991.8:0 ENST00000326094.4:0 NM_030940:0 uc004aop.4:0 uc064ubv.1:0 AK309289:0 AK225937:0 AL834356:0 BC002675:0 AF284752:0 AK055643:0 AY015642:2 BC071621:3 BC053900:17 AB528754:54 AM393721:54 AK296093:-179 ENST00000311534.6:404 uc064ubu.1:404 |
TATA-Box annotation
| Distance to TSS: | 28 |
|---|---|
| Nearest PromoterID: | NM_030940 |
| Entrez ID: | 81689 |
| Nearest Unigene: | Hs.449291 |
| Nearest Refseq: | NM_030940 |
| Nearest Ensembl: | ENSG00000135070 |
| Gene Name: | iron-sulfur cluster assembly 1 |
| Gene Alias: | HBLD2 |
| Gene Description: | iron-sulfur cluster assembly 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.13 |
| GC%: | 0.726368 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
