Difference between revisions of "TSS:Hg 101283.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.03 |distance_to_tss=-338 |entrez_id=53358 |gc_percent=0.422886 |gene_alias=N-Shc|NSHC|RAI|SHCC |gene_description=SHC adaptor protein 3 |gene_name=SH...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |NSHC= | ||
| + | |RAI= | ||
| + | |SHCC= | ||
| + | |all_trans=ENST00000375835.8:306 NM_016848:306 uc004aqf.2:306 BC026314:306 D84361:433 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.03 | |cpg_percent=0.03 | ||
| + | |distance=306 | ||
|distance_to_tss=-338 | |distance_to_tss=-338 | ||
| + | |end=89179137 | ||
|entrez_id=53358 | |entrez_id=53358 | ||
|gc_percent=0.422886 | |gc_percent=0.422886 | ||
|gene_alias=N-Shc|NSHC|RAI|SHCC | |gene_alias=N-Shc|NSHC|RAI|SHCC | ||
|gene_description=SHC adaptor protein 3 | |gene_description=SHC adaptor protein 3 | ||
| − | |gene_name=SHC3 | + | |gene_id=53358 |
| + | |gene_name=SHC (Src homology 2 domain containing) transforming protein 3 | ||
| + | |gene_source=HGNC:18181 | ||
| + | |gene_symbol=SHC3 | ||
| + | |gene_synonyms=N-Shc NSHC SHCC | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:18181 | ||
|nearest_ensembl=ENSG00000148082 | |nearest_ensembl=ENSG00000148082 | ||
|nearest_promoter_id=NM_016848 | |nearest_promoter_id=NM_016848 | ||
|nearest_refseq=NM_016848 | |nearest_refseq=NM_016848 | ||
|nearest_unigene=Hs.292737 | |nearest_unigene=Hs.292737 | ||
| + | |num_trans=5 | ||
| + | |species=human | ||
| + | |start=89179072 | ||
| + | |strand=- | ||
|tata_box="-47(TCTTAAAAAGCC,+,0.00)" | |tata_box="-47(TCTTAAAAAGCC,+,0.00)" | ||
| + | |transcript_name=ENST00000375835.8 NM_016848 uc004aqf.2 BC026314 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_101283.1 | |tss_id=hg_101283.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=Q92529 | ||
}} | }} | ||
Revision as of 18:36, 8 March 2018
Basic information about the TSS
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|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000375835.8 NM_016848 uc004aqf.2 BC026314 |
|---|---|
| Distance: | 306 |
| Num_trans: | 5 |
| All_trans: | ENST00000375835.8:306 NM_016848:306 uc004aqf.2:306 BC026314:306 D84361:433 |
TATA-Box annotation
| Distance to TSS: | -338 |
|---|---|
| Nearest PromoterID: | NM_016848 |
| Entrez ID: | 53358 |
| Nearest Unigene: | Hs.292737 |
| Nearest Refseq: | NM_016848 |
| Nearest Ensembl: | ENSG00000148082 |
| Gene Name: | SHC (Src homology 2 domain containing) transforming protein 3 |
| Gene Alias: | N-Shc |
| Gene Description: | SHC adaptor protein 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.03 |
| GC%: | 0.422886 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-47(TCTTAAAAAGCC,+,0.00)" |
