Difference between revisions of "TSS:Hg 101380.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.215 |distance_to_tss=32 |entrez_id=4783 |gc_percent=0.840796 |gene_alias=E4BP4|IL3BP1|NF-IL3A|NFIL3A |gene_description="nuclear factor, interleukin...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |IL3BP1= | ||
| + | |NF-IL3A= | ||
| + | |NFIL3A= | ||
| + | |all_trans=ENST00000297689.3:-22 NM_005384:-22 uc004arh.3:-22 S79880:140 X64318:140 U26173:140 AK313970:142 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.215 | |cpg_percent=0.215 | ||
| + | |distance=-22 | ||
|distance_to_tss=32 | |distance_to_tss=32 | ||
| + | |end=91423840 | ||
|entrez_id=4783 | |entrez_id=4783 | ||
|gc_percent=0.840796 | |gc_percent=0.840796 | ||
|gene_alias=E4BP4|IL3BP1|NF-IL3A|NFIL3A | |gene_alias=E4BP4|IL3BP1|NF-IL3A|NFIL3A | ||
|gene_description="nuclear factor, interleukin 3 regulated" | |gene_description="nuclear factor, interleukin 3 regulated" | ||
| − | |gene_name=NFIL3 | + | |gene_id=4783 |
| + | |gene_name="nuclear factor, interleukin 3 regulated" | ||
| + | |gene_source=HGNC:7787 | ||
| + | |gene_symbol=NFIL3 | ||
| + | |gene_synonyms=E4BP4 NF-IL3A NFIL3A | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:7787 | ||
|nearest_ensembl=ENSG00000165030 | |nearest_ensembl=ENSG00000165030 | ||
|nearest_promoter_id=NM_005384 | |nearest_promoter_id=NM_005384 | ||
|nearest_refseq=NM_005384 | |nearest_refseq=NM_005384 | ||
|nearest_unigene=Hs.79334 | |nearest_unigene=Hs.79334 | ||
| + | |num_trans=7 | ||
| + | |species=human | ||
| + | |start=91423819 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000297689.3 NM_005384 uc004arh.3 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_101380.1 | |tss_id=hg_101380.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=A0A024R241 Q16649 | ||
}} | }} | ||
Revision as of 18:41, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000297689.3 NM_005384 uc004arh.3 |
|---|---|
| Distance: | -22 |
| Num_trans: | 7 |
| All_trans: | ENST00000297689.3:-22 NM_005384:-22 uc004arh.3:-22 S79880:140 X64318:140 U26173:140 AK313970:142 |
TATA-Box annotation
| Distance to TSS: | 32 |
|---|---|
| Nearest PromoterID: | NM_005384 |
| Entrez ID: | 4783 |
| Nearest Unigene: | Hs.79334 |
| Nearest Refseq: | NM_005384 |
| Nearest Ensembl: | ENSG00000165030 |
| Gene Name: | "nuclear factor, interleukin 3 regulated" |
| Gene Alias: | E4BP4 |
| Gene Description: | "nuclear factor, interleukin 3 regulated" |
| Gene Type: | protein-coding |
| CpG%: | 0.215 |
| GC%: | 0.840796 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
