Difference between revisions of "TSS:Hg 101412.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.015 |distance_to_tss=49333 |entrez_id=100500918 |gc_percent=0.402985 |gene_alias=mir-3651 |gene_description=microRNA 3651 |gene_name=MIR3651 |gene_t...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=ENST00000474340.1:-13 uc064uhc.1:-13 AK057920:-13 ENST00000473915.1:-234 uc064uhd.1:-234 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
| + | |distance=-13 | ||
|distance_to_tss=49333 | |distance_to_tss=49333 | ||
| + | |end=92243215 | ||
|entrez_id=100500918 | |entrez_id=100500918 | ||
|gc_percent=0.402985 | |gc_percent=0.402985 | ||
|gene_alias=mir-3651 | |gene_alias=mir-3651 | ||
|gene_description=microRNA 3651 | |gene_description=microRNA 3651 | ||
| − | |gene_name= | + | |gene_id=3376 |
| + | |gene_name=isoleucyl-tRNA synthetase | ||
| + | |gene_source=HGNC:5330 | ||
| + | |gene_symbol=IARS | ||
| + | |gene_synonyms=IARS1 ILRS | ||
|gene_type=ncRNA | |gene_type=ncRNA | ||
| + | |hgnc_mgi_id=HGNC:5330 | ||
|nearest_ensembl=ENSG00000281156 | |nearest_ensembl=ENSG00000281156 | ||
|nearest_promoter_id=NR_037424 | |nearest_promoter_id=NR_037424 | ||
|nearest_refseq=NR_037424 | |nearest_refseq=NR_037424 | ||
|nearest_unigene= | |nearest_unigene= | ||
| + | |num_trans=5 | ||
| + | |species=human | ||
| + | |start=92243213 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000474340.1 uc064uhc.1 AK057920 | ||
| + | |tss_classification=no | ||
|tss_id=hg_101412.1 | |tss_id=hg_101412.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 18:42, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000474340.1 uc064uhc.1 AK057920 |
|---|---|
| Distance: | -13 |
| Num_trans: | 5 |
| All_trans: | ENST00000474340.1:-13 uc064uhc.1:-13 AK057920:-13 ENST00000473915.1:-234 uc064uhd.1:-234 |
TATA-Box annotation
| Distance to TSS: | 49333 |
|---|---|
| Nearest PromoterID: | NR_037424 |
| Entrez ID: | 100500918 |
| Nearest Unigene: | |
| Nearest Refseq: | NR_037424 |
| Nearest Ensembl: | ENSG00000281156 |
| Gene Name: | isoleucyl-tRNA synthetase |
| Gene Alias: | mir-3651 |
| Gene Description: | microRNA 3651 |
| Gene Type: | ncRNA |
| CpG%: | 0.015 |
| GC%: | 0.402985 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
