Difference between revisions of "TSS:Hg 101435.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.01 |distance_to_tss=55 |entrez_id=54829 |gc_percent=0.412935 |gene_alias=OS3|PLAP-1|PLAP1|SLRR1C |gene_description=asporin |gene_name=ASPN |gene_typ...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |PLAP-1= | ||
| + | |PLAP1= | ||
| + | |SLRR1C= | ||
| + | |all_trans=ENST00000375544.7:0 ENST00000375543.1:0 uc010mqy.3:0 uc004ase.3:0 BC063114:0 BC022059:0 AY358329:5 AY029191:11 AK308107:26 NM_001193335:-48 NM_017680:-48 AK172737:121 AK304501:128 AK027359:147 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
| + | |distance=0 | ||
|distance_to_tss=55 | |distance_to_tss=55 | ||
| + | |end=92482514 | ||
|entrez_id=54829 | |entrez_id=54829 | ||
|gc_percent=0.412935 | |gc_percent=0.412935 | ||
|gene_alias=OS3|PLAP-1|PLAP1|SLRR1C | |gene_alias=OS3|PLAP-1|PLAP1|SLRR1C | ||
|gene_description=asporin | |gene_description=asporin | ||
| − | |gene_name=ASPN | + | |gene_id=54829 |
| + | |gene_name=asporin | ||
| + | |gene_source=HGNC:14872 | ||
| + | |gene_symbol=ASPN | ||
| + | |gene_synonyms=FLJ20129 PLAP1 SLRR1C | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:14872 | ||
|nearest_ensembl=ENSG00000106819 | |nearest_ensembl=ENSG00000106819 | ||
|nearest_promoter_id=NM_001193335 | |nearest_promoter_id=NM_001193335 | ||
|nearest_refseq=NM_017680 | |nearest_refseq=NM_017680 | ||
|nearest_unigene=Hs.435655 | |nearest_unigene=Hs.435655 | ||
| + | |num_trans=14 | ||
| + | |species=human | ||
| + | |start=92482499 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000375544.7 ENST00000375543.1 uc010mqy.3 uc004ase.3 BC063114 BC022059 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_101435.1 | |tss_id=hg_101435.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=Q05CQ6 Q5TBF2 Q6P528 Q9BXN1 | ||
}} | }} | ||
Revision as of 18:43, 8 March 2018
Basic information about the TSS
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|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000375544.7 ENST00000375543.1 uc010mqy.3 uc004ase.3 BC063114 BC022059 |
|---|---|
| Distance: | 0 |
| Num_trans: | 14 |
| All_trans: | ENST00000375544.7:0 ENST00000375543.1:0 uc010mqy.3:0 uc004ase.3:0 BC063114:0 BC022059:0 AY358329:5 AY029191:11 AK308107:26 NM_001193335:-48 NM_017680:-48 AK172737:121 AK304501:128 AK027359:147 |
TATA-Box annotation
| Distance to TSS: | 55 |
|---|---|
| Nearest PromoterID: | NM_001193335 |
| Entrez ID: | 54829 |
| Nearest Unigene: | Hs.435655 |
| Nearest Refseq: | NM_017680 |
| Nearest Ensembl: | ENSG00000106819 |
| Gene Name: | asporin |
| Gene Alias: | OS3 |
| Gene Description: | asporin |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.412935 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
